Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03112 ATGGGAGTTTCTTCAGAACCTTTGCTTGTTTCCCTTTCTTTGAAAGATCTAGCTGGTGAAAACAACAACAATTCATATGGATCTTTGTGGAGCAAAGTGTTGGCAGCCAACTCAAAGAAGCAGAAGATCGTGTCCAAGAAAAGTGCCTATATCAGCTGCAGGCCACGGAGAATTTTAATGACGAGGAGAGCAGGGTTGGTCGAAGGTtctagaagaagaagaagaagaagctgtgGAATTGAGAGAAGGGTAAGAACACTGAAGAGGCTTTTACCCAGCAGCGAGTCGGTGGGGTTGGATGGGCTGTTCAGGGAGACAGCCGATTACATTTTGTCATTACAAATGAGAATGAGAGTGATGCAGATTGTGGTTGAGGTATTAACGGGCTCTGATGATATATG 401 0.4165 MGVSSEPLLVSLSLKDLAGENNNNSYGSLWSKVLAANSKKQKIVSKKSAYISCRPRRILMTRRAGLVEGSRRRRRRSCGIERRVRTLKRLLPSSESVGLDGLFRETADYILSLQMRMRVMQIVVEVLTGSDDI 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03112 133 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 14 129 IPR044660 GO:0006355
Bva04g03112 133 PANTHER TRANSCRIPTION FACTOR UPBEAT1 14 129 - -
Bva04g03112 133 CDD bHLH_AtIBH1_like 79 124 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03112 Bva-Chr4 25656516 25657020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03112 59 133 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G47270 52.632 4.40e-18 72.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03112 - - gmx:100794627 127.872