Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03103 ATGATGGTGCTCGTAGTGTTTATCTCCATAGGTCTGCTGATGAAGGTTCAACATTTGTTGCTGAAATGGTTGCTTGCATTGTCTTGCGTAGTGTTTATTGCTGATGTTGGTGCGTATAGCAAAGCAATGGAAGCCCCATATGTATCTCCTGCTAGACCACCAATGGCTGCTATTGTTGTTCGTGACCAACCACTTCCAGCAAACTTCCCGGTTTCCTATAGACATGGGTGGAAGCATTTTCCATCACATGGTGTAGCAATTCCAGCACAGTCTCCAGCCCATCCGCCATCTGATCATCTCATAAGTGCTGGTCAACCTCCTGTAAGTTCACGTTTATCCAAACCTTTTACGAAGAAGAGTGAATTAAGACCGCCAATTCCCAGTTTTAGAGATATTGCTCCAACACATTCTGCTTCTGGTGCAATTCCTTCCAGTTTGGCTCAGCCACCATTGTCCCCTTATGTTTCCGaTTGTTGTAAACCAGATGCGGTCATGAAGCGAGGGAATAAAGGTTGCCACTGTGTGTATCCCATAAAGCTAGACCTTCTCCTAATAAATATCTCGCAAAGTCCTAATTGGAACGTTTTTCTCACACAATTAGCTTCCCAGCTTGAGTTACTGACCACCCAGATAGAACTGATCAACTTTTACGTACTCAGCTTATCGACATTGAATATATCAATGGATATCACTCCACATAAAGGAATCAGTTTCTCTGCCATTGAGGCATCTGAAATAAACTCATCGTTGTCAATGCATAAGGTTCGTCTGGACCCTAAATTAGTGGGTGACTACAAGCTTCTCAATTTAACTTGGTTTAAGCCTCCACCAGCTTCTCAAGGTCCTGCTTTTGCTGCGTCACCTGTAAAAGCTCCTTCAAATCATTCACCAGCTGCTACATCACTGAGTGCTTCAAATAGGGGGAGAcattctaatttatttcttgttcttgtaaTTGGTGCTGGCATACTCTTTATAGCCATTGTATCTGTCCTTCTACTTTGTTTATGCACGTTGCAATCCAAGCAAAGGCCGTCTCCTATTGAAACCGAAAAGCCAAGGACAGAAAGTACAGTTTCTGCCGTGGGATCTCTTCCCCGCCCTACCAGTACACGGTTTATTGCTTATGAAGAACTTAAGGAAGCAAccaacaactttgaagctgcaAGTGTGCTCGGAGAAGGTGGGTTTGGTAGAGTTTTTAAGGGGGTCTTGAATGATGGTACTCCTGTGGCAATTAAGAGGCTTACTAGTGGAGGGCAACAAGGAGACAAAGaatttttggttgaggttGAGATGCTTAGTCGGTTGCATCATCGTAACCTTGTAAAACTGGTGGGATACTTCAGTAGTCACGAGTCATCCCAAAATCTACTTTGCTATGAGCTTGTCCCTAATGGAAGTTTGGAGGCTTGGCTTCACGGTCCCTTGGGAATAAATTGCCCTTTGGATTGGGACACAAGAATGAAGATTGCGCTTGATGCTGCCAGAGGACTTGCATACCTGCACGAGGACTCACAGCCCTGTGTTATCCACAGAGATTTTAAGGCGTCCAACATACTGCTTGAGAGCAACTTCCATGCTAAAGTTGCAGATTTCGGACTTGCTAAACAGGCACCTGAAGGCAGAGCTAATTACTTGTCTACTCGTGTCATGGGCACATTTGGGTATGTAGCTCCTGAGTATGCCATGACTGGACATCTACTGGTTAAAAGTGACGTGTATAGCTATGGAGTCGTCTTGCTGGAACTGCTGACTGGAAGGAAACCTGTGGATATGTCACAGCCAACTGGGCAAGAAAATCTTGTCACTTGGGCAAGGCCCATCCTTAGAGATAAAGATCGATTGGAAGAGCTTGCTGATCCAAGGCTCCGGGGAAAATACCCAAAGGAAGATTTTGTCCGTGTTTGCACGATTGCCGCAGCTTGCGTTGCACCTGAAGCAAACCAACGACCCACGATGGGTGAAGTTGTGCAGTCACTTAAAATGGTGCAGCGCATAACAGAATATCAGGATTCCATGTTAACCTCTTACAACAATACACGGCCTAACCTAAGACAATCCTCTACTACTTTTGAGTCGGATGGCACATCTTCAATGTTCTCTTCGGGTCCGTACTCTGGTCTTTGTGCCTTTGACAATGACAACATTTCTCGAACGGCAGTTTTCTCTGAAGATCTTCATGAAGGACGATG 2195 0.4387 MMVLVVFISIGLLMKVQHLLLKWLLALSCVVFIADVGAYSKAMEAPYVSPARPPMAAIVVRDQPLPANFPVSYRHGWKHFPSHGVAIPAQSPAHPPSDHLISAGQPPVSSRLSKPFTKKSELRPPIPSFRDIAPTHSASGAIPSSLAQPPLSPYVSDCCKPDAVMKRGNKGCHCVYPIKLDLLLINISQSPNWNVFLTQLASQLELLTTQIELINFYVLSLSTLNISMDITPHKGISFSAIEASEINSSLSMHKVRLDPKLVGDYKLLNLTWFKPPPASQGPAFAASPVKAPSNHSPAATSLSASNRGRHSNLFLVLVIGAGILFIAIVSVLLLCLCTLQSKQRPSPIETEKPRTESTVSAVGSLPRPTSTRFIAYEELKEATNNFEAASVLGEGGFGRVFKGVLNDGTPVAIKRLTSGGQQGDKEFLVEVEMLSRLHHRNLVKLVGYFSSHESSQNLLCYELVPNGSLEAWLHGPLGINCPLDWDTRMKIALDAARGLAYLHEDSQPCVIHRDFKASNILLESNFHAKVADFGLAKQAPEGRANYLSTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDMSQPTGQENLVTWARPILRDKDRLEELADPRLRGKYPKEDFVRVCTIAAACVAPEANQRPTMGEVVQSLKMVQRITEYQDSMLTSYNNTRPNLRQSSTTFESDGTSSMFSSGPYSGLCAFDNDNISRTAVFSEDLHEGR 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03103 731 CDD STKc_IRAK 392 662 - -
Bva04g03103 731 MobiDBLite consensus disorder prediction 678 698 - -
Bva04g03103 731 PANTHER OS01G0750732 PROTEIN 13 731 - -
Bva04g03103 731 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE ALE2 13 731 - -
Bva04g03103 731 Pfam Protein tyrosine and serine/threonine kinase 389 661 IPR001245 GO:0004672|GO:0006468
Bva04g03103 731 ProSiteProfiles Protein kinase domain profile. 386 664 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g03103 731 Gene3D Phosphorylase Kinase; domain 1 349 463 - -
Bva04g03103 731 ProSitePatterns Protein kinases ATP-binding region signature. 392 414 IPR017441 GO:0005524
Bva04g03103 731 MobiDBLite consensus disorder prediction 88 127 - -
Bva04g03103 731 SUPERFAMILY Protein kinase-like (PK-like) 362 663 IPR011009 -
Bva04g03103 731 ProSitePatterns Serine/Threonine protein kinases active-site signature. 510 522 IPR008271 GO:0004672|GO:0006468
Bva04g03103 731 Gene3D Transferase(Phosphotransferase) domain 1 464 684 - -
Bva04g03103 731 MobiDBLite consensus disorder prediction 283 303 - -
Bva04g03103 731 MobiDBLite consensus disorder prediction 345 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03103 Bva-Chr4 25596147 25601467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03103 19 731 Receptor kinase-like Gene Family AT4G02010 68.067 0.0 992
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Bva04g03103 PK_Tyr_Ser-Thr 2.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03103 - - gmx:100793528 1124.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03103 04 25596147 25601467 Bva13g03072 13 21718579 21724303 BWGD