Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03099 ATGGATGACACTGCTTCACCTTCTTCTGTGCTCATACCAGAAAACCAAGCATCCAAGAAACGGAAAACGGTTCAGAAAACAGTTGTCAAGGTGAGAATAGGAGAAAATGTTAGTAAACTGAAGAATGAAGGGCTACCTTCTGATTTTTGGTCTTGGAGGAAATATGGACAAAAACCCATCAAAGGATCTCCTTATCCAAGGGGCTATTACAAGTGCAGCACATCCAAGGGCTGTTCAGCCAAAAAGCAAGTAGAGAGATGCAGAACAGATGCTTCAATGCTCATCATTACCTATACCTCAACCCATAACCATCCATCTCCTGATCTCCCCTCCACCACCAATTCTACCCAACAACCAAAAGAGCCTCAAAGTCAAACCACTGAAGATCTCCCAACTACCatggaggaagagaaagaggatCAGTCTGCAAATCAAGAGAAATTTCATTACTTGCAATCACCAATATGTTGTTCCGAAGATATTGCTATTGACCAAGAAGATCCTTTCAAATTGAACCTACACAAAACCCATGACAGAATTGATCTCCTATTAGAGGAAGAAGAACCCGTTTGTTTCTCCCAGCTCGAGAACCTGTCCACGCCCAAATCAGAAGAACTTGATTTCTTTGATGAGCTTGAAGAGCTCCCCATACCTTCATCTTTCTTCAACTTCATGAGGAGCAATTTTTCCGATGAAAGGATTTCCGTGGCACCTTCCTG 719 0.4131 MDDTASPSSVLIPENQASKKRKTVQKTVVKVRIGENVSKLKNEGLPSDFWSWRKYGQKPIKGSPYPRGYYKCSTSKGCSAKKQVERCRTDASMLIITYTSTHNHPSPDLPSTTNSTQQPKEPQSQTTEDLPTTMEEEKEDQSANQEKFHYLQSPICCSEDIAIDQEDPFKLNLHKTHDRIDLLLEEEEPVCFSQLENLSTPKSEELDFFDELEELPIPSSFFNFMRSNFSDERISVAPS 239
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03099 239 SUPERFAMILY WRKY DNA-binding domain 43 107 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g03099 239 Pfam WRKY DNA -binding domain 48 105 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03099 239 MobiDBLite consensus disorder prediction 100 144 - -
Bva04g03099 239 ProSiteProfiles WRKY domain profile. 41 107 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03099 239 Gene3D WRKY domain 31 108 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g03099 239 MobiDBLite consensus disorder prediction 100 130 - -
Bva04g03099 239 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 13 224 IPR044810 GO:0003700
Bva04g03099 239 SMART WRKY_cls 46 106 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g03099 239 MobiDBLite consensus disorder prediction 1 23 - -
Bva04g03099 239 MobiDBLite consensus disorder prediction 1 18 - -
Bva04g03099 239 PANTHER WRKY TRANSCRIPTION FACTOR 69-RELATED 13 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03099 Bva-Chr4 25581950 25583260 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03099 18 221 WRKY Transcription Factor Family AT4G01250 42.439 1.36e-38 134
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva04g03099 WRKY 3.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03099 - - var:108328057 327.791