Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03097 ATGGTGTCCAAAGCAACCGACTCTGCAACCAAAATTAGAAAATCACAAGGGGAACCGACAAATGATCCTGTTGGAACCTTGCTAACCAAAATAAATCAgctgagaaagaaaattcaggCGGAGAGAGCTGAATTAATTCGAGAAAAACTTCAGAAGAATGGGAAGAAGTTACAGTGTCATATTTCGCATATCATGTCAGAAATGTCAAGAAGGGAATCTTCAcataaagaagaagatagcACCAGTCAAAGGCGTTTGTCAAGAACTGCTTTCCCTATGTTTAAGTTCAGTGGTATGTCTCTAGGTTCAGATGAAAAAGACCTCGTTAATGATGTAGAAGAATGCACCTCATCAAGTATCATGCTTccatatattgaaaaattaccTCGATATACATCTTGGATGTTTTTGGACAGAAATCAGAGAATGACTGAAGATCAGTCAGTAGTTGGGAGAAGACGAATCTACTATGATCCAAATGGAAGTGAAGCACTACTGTGCAGTGACAGTGAGGAGGAGTTCACAGAACCTGAGGAAGAGAAACATGAATTTTCAGAGGGTGAAGATCAAGTTTTATGGATGGCATTTGAGGAGCATGGGTTAACTGAGCAAGTATTGAATATTGTGAGACAGTTTGTTGGAGGTACCAGTTTGGAAATCCAGGAGAGGTACAAAATtctcaagaaaaagaatgtgGGAATGCAAGACCAGGATGCAAAAAATATCTCGAGTTCTGGAGATTACGAATCTCATATTGGCATATGCATGGAGAAAAGTCTGAGTGCTGCTTTAGATTCTTTTGATAAACTTTTCTGTCGCCGTTGCATGATGTTTGACTGCTGTCTGCATGGATGCTCCCAAGCTTTAATTTATCCTTGTGAAAAGCAGCCATCTTGGTCTGAACATGAAGAAGACAAGAAACCATGCAGTGATCAGTGCTACCTtcaaCTGAAGGctgtaaaaaatttgttagaaGATTCAACTTCTAGATCTTCTCAGGATAAGAAAACCACAACCATTGGAGAGGGAGGCAGGACATTGGAAACCTCTGGTATGGTGGGGCCAAGTAATCAGAGTTCTACAACTATCTTGGAGGAAGAAAGATGCAATactgtaaaaacaaaaacttttgcAACAGAAGTTGATTGTGGTGAATCTCTCAATTTAAATTTGCCTCTGTCAGAAAGCCTGGGAAAACGAAAGGTCACAAATCACTCAAATACAGCAACATGTGACTCAACCTTGGTTCCTGGTGATTCTCAGAGCTCTTGtaaaaggcaaaagaaaatctcaGATACTGATGTAGTTACTGTAATTAGTGATGCTGACATGGATCTAAATTCAGGCAACTCTGATAAAAATAACTGCACAGTAACCATTGCGTCTTTAAATGATTCTGTTGAATGTAACTCAAATAGATTGATATTTTCTGGTAGCACTTTCCATGGTGAACATGACAGAAGTGTTCACGTTGGACCACAAGATATCACTGATGAGACAGTATTAAAGCAGTCATCTAATCCAATGGAAGGGCAAGTTGAAGGGAAGCAAAGTCTCTCAGATTGGAAACCTTTGGAGAAAGAATTATACTCTAAGGGATTGGAGATGTTTGGAAGAAACAGTTGCCTCATAGCAAGAAACTTACTTTCTGGGTTAAAGACTTGCATAGAGGTAGCTAGTTACATGCATTCTGGTGGAACATCAACCCTACATGGATCTGTTGTTGCACCAAGTTCAATCATGGATGACACTGGAAAAACTGATGCCGATTACACAGACCAGGAGATGCCAACAAGACCACGGTTGCTGCGGAAAAAGGGCAAAGCGAGGAAGTTTAAATATTCTTGGAAGTCTGCTGGCCACCCATCAATATGGAAAAGAATTGCTGATGGGAAAAACCAATCTTGCAAGCAGTATACACCTTGTGGATGTCAGTCAATGTGTGGAAAGCAATGTCCTTGCCTTCATAGTGGAACCTGCTGTGAAAAATATTGTGGGTGTTCAAAAAGCTGCAAAAATCGATTCAGGGGATGCCACTGTGCCAAGAGTCAATGCAGAAGTCGGCAATGCCCATGCTTTGCTGCTGGACGTGAATGTGACCCAGATGTCTGTCGAAATTGTTGGGTCAGCTGTGGAGATGGTACATTAGGGGAACCACCTAGACGTGGGGATGGTCAATGTGGAAATATGAGGCTCCTTTTGAGGCAACAACAGAGGATTCTTTTAGCAAAGTCTGATGTTGCAGGATGGGGAGCCTTCTTAAAGAACCCTGTTAACAAAAATGATTACCTAGGAGAATACACTGGTGAACTGATATCCCACCGTGAAGCAGATAAGCGTGGGAAAATATATGATCGTGCAAACTCGTCATTCCTTTTCGACTTGAATGATCAGTATGTTCTGGATGCTTATCGTAAAGGAGACAAGCTGAAATTTGCAAACCACTCATCAAATCCCAACTGCTACGCGAAGGTGATGCTGGTTGCCGGGGATCATCGAGTAGGCATCTTGGCCAAGGAAcacattgaagctagtgagGAGCTCTTCTATGATTATCGTTATGGTCCAGATCAAGCACCCGCATGGGCTCGTAAACCTGAGGGTTCTAAAAGAGATGAATCATCAATTTCCCAAGGCAGAGCGAAAAAGCACCAGTCTCATTG 2663 0.3962 MVSKATDSATKIRKSQGEPTNDPVGTLLTKINQLRKKIQAERAELIREKLQKNGKKLQCHISHIMSEMSRRESSHKEEDSTSQRRLSRTAFPMFKFSGMSLGSDEKDLVNDVEECTSSSIMLPYIEKLPRYTSWMFLDRNQRMTEDQSVVGRRRIYYDPNGSEALLCSDSEEEFTEPEEEKHEFSEGEDQVLWMAFEEHGLTEQVLNIVRQFVGGTSLEIQERYKILKKKNVGMQDQDAKNISSSGDYESHIGICMEKSLSAALDSFDKLFCRRCMMFDCCLHGCSQALIYPCEKQPSWSEHEEDKKPCSDQCYLQLKAVKNLLEDSTSRSSQDKKTTTIGEGGRTLETSGMVGPSNQSSTTILEEERCNTVKTKTFATEVDCGESLNLNLPLSESLGKRKVTNHSNTATCDSTLVPGDSQSSCKRQKKISDTDVVTVISDADMDLNSGNSDKNNCTVTIASLNDSVECNSNRLIFSGSTFHGEHDRSVHVGPQDITDETVLKQSSNPMEGQVEGKQSLSDWKPLEKELYSKGLEMFGRNSCLIARNLLSGLKTCIEVASYMHSGGTSTLHGSVVAPSSIMDDTGKTDADYTDQEMPTRPRLLRKKGKARKFKYSWKSAGHPSIWKRIADGKNQSCKQYTPCGCQSMCGKQCPCLHSGTCCEKYCGCSKSCKNRFRGCHCAKSQCRSRQCPCFAAGRECDPDVCRNCWVSCGDGTLGEPPRRGDGQCGNMRLLLRQQQRILLAKSDVAGWGAFLKNPVNKNDYLGEYTGELISHREADKRGKIYDRANSSFLFDLNDQYVLDAYRKGDKLKFANHSSNPNCYAKVMLVAGDHRVGILAKEHIEASEELFYDYRYGPDQAPAWARKPEGSKRDESSISQGRAKKHQSH 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03097 887 ProSiteProfiles CXC domain profile. 625 724 IPR026489 -
Bva04g03097 887 MobiDBLite consensus disorder prediction 1 25 - -
Bva04g03097 887 Pfam SET domain 749 852 IPR001214 GO:0005515
Bva04g03097 887 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE 14 885 - -
Bva04g03097 887 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 14 885 IPR045318 GO:0006338|GO:0018024
Bva04g03097 887 MobiDBLite consensus disorder prediction 864 880 - -
Bva04g03097 887 Coils Coil 24 51 - -
Bva04g03097 887 CDD SET_EZH 738 854 - -
Bva04g03097 887 MobiDBLite consensus disorder prediction 66 84 - -
Bva04g03097 887 SMART set_7 738 859 IPR001214 GO:0005515
Bva04g03097 887 SUPERFAMILY SET domain 611 858 IPR046341 -
Bva04g03097 887 MobiDBLite consensus disorder prediction 66 86 - -
Bva04g03097 887 MobiDBLite consensus disorder prediction 325 365 - -
Bva04g03097 887 MobiDBLite consensus disorder prediction 860 887 - -
Bva04g03097 887 ProSiteProfiles SET domain profile. 738 853 IPR001214 GO:0005515
Bva04g03097 887 Pfam CXC domain 677 708 IPR041355 -
Bva04g03097 887 SMART CXC_2 673 710 IPR033467 -
Bva04g03097 887 Gene3D SET domain 639 855 IPR046341 -
Bva04g03097 887 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 3 887 IPR025778 GO:0031519
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03097 Bva-Chr4 25570481 25577858 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03097 727 856 C2H2 Transcription Factor Family AT2G23740 26.531 1.13e-08 57.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bva04g03097 SET 3.3e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03097 - - gmx:100808730 1268.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03097 04 25570481 25577858 Bva13g03063 13 21682546 21690292 BWGD