Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03091 ATGAAGGACCTGGACTTCGCCGCAGACAAAGTTCTAGCGAAGGAGTTCCTCTCGAATTTCGCCGATGCAAATGGTGAAGCTAAATACATGAAAATTCTGCAAGAAGTCGCTAACCACAAAACTAGAGCAATCCAGATCTATCTTGaggatttaattaatTACAAAGATTTAGACGAAGAATTTCTCAGGAGGGTTACAGAAAACACTCGGAGGTATATCGGAATATTTGCTGATGCTATTGATGAGCTGATGCCAGAACCCACCGAGGCCTTTACGGATGATGATCATGACATCTTGATGACACAAAGATCTGACGAAGGTGTGGAAAGTGCTGATGGTTCTGACCCACTTCAGAAGATGCCTCCTGAGATCAAACGCTATTTtGAAGTCTATATTAGAGCCTCTTCCAAAGGGCGACCATTTACTATTAGGGAAGTTAAGGCTTCATACATTGGTCAGCTTGTAAGAATATCTGGTATTGTGACACGCTGTTCGGATGTTAAGCCATTGATGCAGGTAGCTGTATACACATGTGAGGATTgtggttttgaaatttaccAGGAAGTAACAGCTCGAGTCTTCATGCCTTTGTTTGAATGTCCATCTAAGCGCTGTGACACAAACAGATCTAAAGGGAACCTCATCCTCCAACTAAGAGCATCGAAGTTCTTGAAATTTCAGGAGgcaaaaattcaagaattagCTGAACATGTTCCAAAAGGCCATATTCCACGTACTATGACGGTTCATTTTAGGGGAGAGCTCACAAGAAAGGTAGCTCCAGGTGATGTGGTCGAATTATCTGGGATTTTTCTTCCTATTCCTTACACTGGTTTTAGAGCAATGCGTGCTGGCCTAGTTGCTGATACTTATTTAGAGGCCATGTCTGTCACccatttcaagaaaaaatatgaagaATATGAACTTAGAGGTGATGAGGAAGAGCAAATTGCACGTTTAGCGGAAGATGGGGatatttacaataaattagCAAGATCGCTTGCTCCTGAAATTTTTGGTCATGACGATATTAAAAAGGCTCTGCTGCTTCTCCTTGTTGGTGCTCCCCATCGGAAGTTGAAAGATGGGATGAAGATTAGAGGAGACCTACATATATGTTTGATGGGTGATCCTGGTGTTGCAAAGAGTCAACTCCTTAAACATATAATCAATGTAGCACCTAGGGGGGTGTACACCACTGGCAGAGGAAGCAGTGGAGTTGGTCTAACTGCTGCTGTTCAGAAAGATCCAGTAACAAATGAGATGGTTCTGGAAGGGGGAGCATTGGTGCTAGCAGATATGGGCATATGCGCCATTGATGAGTTTGACAAGATGGATGAATCAGATCGTACTGCTATACATGAAGTTATGGAACAGCAAACTGTTAGCATTGCCAAAGCTGGGATCACCACATCATTGAATGCAAGAACTGCTGTCCTTGCAGCAGCTAATCCAGCATGGGGGAGATATGATCTACGGAGAACTCCGgctgaaaatattaatcttcCTCCTGCCCTGCTATCAAGATTTGATTTGCTGTGGTTAATCCTTGATCGAGCTGATATGGATAGTGATCTTGAAATGGCTAGGCATGTTGTTTATGTCCACCAAAATAAAGAATCTCCCGCTCTGGGATTCACTCCACTTGAACCATCTCTGCTCCGTGCATATATATCGGCTGCAAGAAGATTGTCTCCTAGTGTTCCAAGGGAACTGGAAGAGTATATCGCTAGTGCTTACTCCAGCATTCGCCAAGAAGAAGCCAAGTCTAATACTCCTCACTCCTATACGACTATCAGAACTTTGCTCAGCATTCTTCGCGTATCAGCAgCGCTAGCAAGACTTCGTTTTTCTGACTTTGTTGCTCAGAGTGATGTGGATGAAGCGCTGAGGCTAATGCAGATGTCTAAGTTCTCTTTGTACTCTGATGAGAGGCAAAAATCTGGTTTAGATGCCATATCTGATATCTATTCTATACTGCGAGATGAAGCTGCTAGGAGTAATAGGATGGACGTAAGCTATGCCCATGCTCTTAATTGGATATCTAGAAAGGGTTACAGCGAAGCCCAATTGAAAGAGTGTTTGGAGGAGTATGCGGCCTTGAACGTATGGCAGATACATCCTCACACTTTCGATATCCGATTTATTGACGCCTG 2156 0.4179 MKDLDFAADKVLAKEFLSNFADANGEAKYMKILQEVANHKTRAIQIYLEDLINYKDLDEEFLRRVTENTRRYIGIFADAIDELMPEPTEAFTDDDHDILMTQRSDEGVESADGSDPLQKMPPEIKRYFEVYIRASSKGRPFTIREVKASYIGQLVRISGIVTRCSDVKPLMQVAVYTCEDCGFEIYQEVTARVFMPLFECPSKRCDTNRSKGNLILQLRASKFLKFQEAKIQELAEHVPKGHIPRTMTVHFRGELTRKVAPGDVVELSGIFLPIPYTGFRAMRAGLVADTYLEAMSVTHFKKKYEEYELRGDEEEQIARLAEDGDIYNKLARSLAPEIFGHDDIKKALLLLLVGAPHRKLKDGMKIRGDLHICLMGDPGVAKSQLLKHIINVAPRGVYTTGRGSSGVGLTAAVQKDPVTNEMVLEGGALVLADMGICAIDEFDKMDESDRTAIHEVMEQQTVSIAKAGITTSLNARTAVLAAANPAWGRYDLRRTPAENINLPPALLSRFDLLWLILDRADMDSDLEMARHVVYVHQNKESPALGFTPLEPSLLRAYISAARRLSPSVPRELEEYIASAYSSIRQEEAKSNTPHSYTTIRTLLSILRVSAALARLRFSDFVAQSDVDEALRLMQMSKFSLYSDERQKSGLDAISDIYSILRDEAARSNRMDVSYAHALNWISRKGYSEAQLKECLEEYAALNVWQIHPHTFDIRFIDA 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03091 718 SMART mcm 139 638 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bva04g03091 718 PANTHER DNA REPLICATION LICENSING FACTOR MCM7 36 696 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva04g03091 718 Gene3D - 311 643 IPR027417 -
Bva04g03091 718 PRINTS Mini-chromosome maintenance (MCM) protein family signature 367 382 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva04g03091 718 PRINTS Mini-chromosome maintenance (MCM) protein family signature 455 468 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva04g03091 718 PRINTS Mini-chromosome maintenance (MCM) protein family signature 479 491 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva04g03091 718 PRINTS Mini-chromosome maintenance (MCM) protein family signature 427 441 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva04g03091 718 PRINTS Mini-chromosome maintenance (MCM) protein family signature 506 514 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva04g03091 718 SUPERFAMILY Nucleic acid-binding proteins 13 294 IPR012340 -
Bva04g03091 718 Gene3D - 143 271 IPR012340 -
Bva04g03091 718 Gene3D - 10 101 - -
Bva04g03091 718 Pfam MCM OB domain 143 273 IPR033762 -
Bva04g03091 718 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 336 648 IPR027417 -
Bva04g03091 718 Pfam MCM AAA-lid domain 553 636 IPR041562 -
Bva04g03091 718 ProSitePatterns MCM family signature. 435 443 IPR018525 GO:0003677|GO:0005524|GO:0006260
Bva04g03091 718 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 158 169 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva04g03091 718 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 285 295 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva04g03091 718 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 120 132 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva04g03091 718 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 176 187 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva04g03091 718 PRINTS Mini-chromosome maintenance (MCM) protein 7 signature 193 205 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva04g03091 718 Pfam MCM N-terminal domain 14 132 IPR027925 -
Bva04g03091 718 Pfam MCM P-loop domain 314 536 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva04g03091 718 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 36 696 IPR031327 GO:0003677|GO:0005524|GO:0032508
Bva04g03091 718 ProSiteProfiles MCM family domain profile. 326 532 IPR001208 GO:0003677|GO:0005524|GO:0032508
Bva04g03091 718 CDD MCM7 329 636 IPR008050 GO:0003677|GO:0003678|GO:0005524|GO:0006270|GO:0042555
Bva04g03091 718 Gene3D - 170 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03091 Bva-Chr4 25541592 25547245 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03091 1 716 Core DNA Replication Machinery Family AT4G02060 85.615 0.0 1281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03091 K02210 - qsu:112007744 1350.11