Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03081 ATGGATGCATCAAAATCTGAGGAGTCTGTAGATGGGATTAAGATTAATGATGATAGTAAAGATGAGGCAGACATGGAATCTCTGGAAAAAATGTCAGTTCCTTCGTGTAGAAATGATGCCTCAACTTCCCTAAAAATTAAGcaagacaatttttttgaagtagACAAGGAGAATAGACCAATAGATCGAGAGCAGGATAAAGAGGTGATCAAACGTCTTGGAAATTCAACAGCCAAATCAAGTGTATGGCCAGCGAAGGTCAACCAAGAGGTTGGAAAAGCTGGTCTTAATTCGCTTGTTCAACAAGATAACGCAAGAGTGAATACTGAAGCTGTATGTTTTATATTAAGTGGCTATAACCTACAGAGAAAGGAGTTTCGGCAAGTTATTAGGCGTTTAAAGGGAAGGGTTTGCCGGGATTCTCATCAGTGGTCATATCAGGGAACACATTTCATAGCCCCTGATCCTATACGCAGGACGGAAAATTTTTTTGCTGCTGCTGCGTCAGGAAGGTGGATTCTTAAAATGGATTACTTAACTGCCAGTGGTGAAGAAGGAAGATTCTTGGCAGAGGAGCCTTACGAGTGGCACAAGAACGGCCTCAGTGAGGACGGTGCGATAGATTTGGAGGCTCCAAGAAAGTGGCTACTGTTGAAAGAAAGAACGGGTCACGGTGCCTTATACGGAATGCGGATTATTATATATGGGGATTGCATTGCCCCACCTTTGTCAAAGCCGGAGATGGAACAATATTGGCAACATCTCCTCCTTACACTCGCTTCCTTGATGCTGAAATTGATTATGCTAGTTACCCCCGGCATGCCACGTGCTGACTTGTGGGTCCAAGAATTGTTGAAAAATGAGATTCCCTGTGTTTCATTTCAGCAGACTACTTGGTCGAGTATGTATGCAAGCATGGGCTCTCCCTTGAGAAACATAGGAGAGGTAATGCTGATTTGTGGTAATGAAAGTGGTTCCGTTGGTACCGGTATTGGCACCCATATTGATTGCTGTGATCCTCCTCTCAAACACGTTCCTGAGGAggattggtttggttttgtCCAAAATGCAGTAAAAGCTCAAACTCAtccaagaaaacaagaaagagaatcTTGTCTTCATCCAAAGTCTTCGTA 1136 0.412 MDASKSEESVDGIKINDDSKDEADMESLEKMSVPSCRNDASTSLKIKQDNFFEVDKENRPIDREQDKEVIKRLGNSTAKSSVWPAKVNQEVGKAGLNSLVQQDNARVNTEAVCFILSGYNLQRKEFRQVIRRLKGRVCRDSHQWSYQGTHFIAPDPIRRTENFFAAAASGRWILKMDYLTASGEEGRFLAEEPYEWHKNGLSEDGAIDLEAPRKWLLLKERTGHGALYGMRIIIYGDCIAPPLSKPEMEQYWQHLLLTLASLMLKLIMLVTPGMPRADLWVQELLKNEIPCVSFQQTTWSSMYASMGSPLRNIGEVMLICGNESGSVGTGIGTHIDCCDPPLKHVPEEDWFGFVQNAVKAQTHPRKQERESCLHPKSS 378
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03081 378 CDD BRCT_TopBP1_rpt7 113 186 - -
Bva04g03081 378 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 311 351 IPR044254 -
Bva04g03081 378 PANTHER BRCA1 C TERMINUS DOMAIN CONTAINING PROTEIN, EXPRESSED 5 293 IPR044254 -
Bva04g03081 378 Gene3D BRCT domain 106 221 IPR036420 -
Bva04g03081 378 Pfam BRCA1 C Terminus (BRCT) domain 114 181 IPR001357 -
Bva04g03081 378 SUPERFAMILY BRCT domain 112 199 IPR036420 -
Bva04g03081 378 ProSiteProfiles BRCT domain profile. 114 196 IPR001357 -
Bva04g03081 378 MobiDBLite consensus disorder prediction 1 28 - -
Bva04g03081 378 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03081 Bva-Chr4 25475022 25476941 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03081 47 292 Core DNA Replication Machinery Family AT4G02110 48.638 1.10e-72 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03081 K10728 - gmx:100799144 392.889