Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03076 ATGGGAAGGGCACCCTGTTGTGAGAAAGTGGGTTTAAAGAAGGGCAGGTGGACAGCGGATGAAGACGAGATCTTGATCAAGTACATTCAGGCCAATGGGGAAGGCTCTTGGAGATCCTTACCTAAGAATGcagGATTACTAAGGTGTGGGAAGAGTTGCAGATTAAGATGGATTAACTATTTGAGAGCTGACCTTAAAAGAGGCAACATTTCTCCTCAAGAGGAACATGTCATCATAAGGCTGCATGCTTCTCTGGGCAACAGGTGGTCTTTAATCGCAAGTCACTTGCCCGGAAGAACCGACAACGAGATAAAGAACTACTGGAATTCTCACTTGTGCAGGAGAATCGACACTTTCAGGAGAGTAACCAATATTAGTGACACCACCAAAATGATCATGGATGTTCATAGCAATAGCAACATTCCTCCCAAACGAAGAAGAGGTGGTAAAACAAGCCGTTGGgccatgaagaaaaataaaagcaacagAAAGGAAAGAGATCAGAAACGTAAAGAAAGCAGTACTGTTGGCGTGATTAATGAGAAGGAGGCAGTTCCGGTTCCAACCACCCTAGCTGTAGAAAATGAGATATTGTCCACTGCCATGGAGGATTTCATGGCATTGGAAGCCGAGCAAGTAGACAATAGTAGTGAGAGCGACGCAAGGGTAACTTCTTGTGATCAAGATCAAGGGTTGCAGTTGGAGGAGGTAGAAATCCCAGATCAGACAGAAGACATTGATGGCGGTGGGGCGTTGTGTATTGATGACTCCTTTGACCCTAGTTGGTTGCTGGACGATGGAGATGGAGTTTCGACGTTAAATGATGAAAGAGACGGCCACTTTAATAAGGGTGAACTTGTCGGTGTTGTTAATAATGCCAATGAAAGCGACATTGGTAGGGTCGACTTCTCATGTCCTCCCAAAATGGCGGCTCGCCAGGAGCTGGAGACTGAGAAGAGGGATCACGAGGAATGGTTTTCTTCTGTTACGACGTCGGTTTTTTATGATAACTGGGATTGGGATATGGATTGGGATGGTGCAGTTTTGCAATTGGAAAATCACGAGTCTCGCGATGAGTCATGGTTGGCGGACAAAGAAGAACTTGTCTCTTGGCTATGGGAAGACGATCACGATTGGGAAAGTACAGATTCTCAGAATTTACCGGACATTGAAAGCGACATTGGTAAGGTCGACTTCTTATGTCCTCCCAAAATGGCGGCTAGCCAGGAGCTGGAGCTGGAGACTGAGAAGAGGGATCGCGAGGAGTGGTTTTCTTCTGTTACGACGTCGGTTTTTTATGATAACTGGGATATGGATTGGGATGGTGCAGTTTTACAATTGGAAAATCACGAGTCTCGCGATGAGTCATGGTTGGCGGACAAAGAAGAACTCGTCTCTTGGCTATGGGAAGACGATCACGATTGGGAAAGTACAGATTCTCAGAATTTACGGGACATAGATCCCGAGAAATATAACGCTGTTagtattattgaaaaatatgaagagta 1508 0.4423 MGRAPCCEKVGLKKGRWTADEDEILIKYIQANGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADLKRGNISPQEEHVIIRLHASLGNRWSLIASHLPGRTDNEIKNYWNSHLCRRIDTFRRVTNISDTTKMIMDVHSNSNIPPKRRRGGKTSRWAMKKNKSNRKERDQKRKESSTVGVINEKEAVPVPTTLAVENEILSTAMEDFMALEAEQVDNSSESDARVTSCDQDQGLQLEEVEIPDQTEDIDGGGALCIDDSFDPSWLLDDGDGVSTLNDERDGHFNKGELVGVVNNANESDIGRVDFSCPPKMAARQELETEKRDHEEWFSSVTTSVFYDNWDWDMDWDGAVLQLENHESRDESWLADKEELVSWLWEDDHDWESTDSQNLPDIESDIGKVDFLCPPKMAASQELELETEKRDREEWFSSVTTSVFYDNWDMDWDGAVLQLENHESRDESWLADKEELVSWLWEDDHDWESTDSQNLRDIDPEKYNAVSIIEKYEE 502
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03076 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva04g03076 502 PANTHER MYB TRANSCRIPTION FACTOR 2 379 - -
Bva04g03076 502 CDD SANT 16 61 IPR001005 -
Bva04g03076 502 Gene3D - 71 116 - -
Bva04g03076 502 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 2 379 - -
Bva04g03076 502 Gene3D - 11 67 - -
Bva04g03076 502 MobiDBLite consensus disorder prediction 134 179 - -
Bva04g03076 502 CDD SANT 71 112 IPR001005 -
Bva04g03076 502 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva04g03076 502 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bva04g03076 502 SMART sant 13 63 IPR001005 -
Bva04g03076 502 SMART sant 66 114 IPR001005 -
Bva04g03076 502 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva04g03076 502 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva04g03076 502 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva04g03076 502 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva04g03076 502 MobiDBLite consensus disorder prediction 158 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03076 Bva-Chr4 25453479 25456811 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03076 1 157 MYB Transcription Factor Family AT2G47460 71.069 4.32e-76 242
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva04g03076 Myb_DNA-binding 1.4e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03076 K09422 - qsu:112034953 313.923
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g03076 04 25453479 25456811 Bva13g03038 13 21575437 21577833 BWGD