Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03061 ATGGCAACGAGAAATCGAACTATACAGTACAGAAAGTACAGAGATGCTGTGAAGAGCGTTCGCACCCCTTTGTCTTCGTCTATGCCTGCTTCGGGCGGTCCCGTGATTGAAATGGTGAGCACTTCACTTCTTCGTCGCAAACAATCTTCATATGCTCCTTTAAGCACCGAAGAACCTGGTACTTCGAGAGATGCATTTACCGTGGGTTTGCCACCAGCATGGGTGGATGATTCTGAAGAAATTGCTACAAACATACAACGTGCTCGTATTAAAATGTCTGAGTTAGTCAAGGCTCATGCAAAGGCTTTAATGCCTTCCTTCGGTGATGGCAAGGAAGATCAACATCAGATTGAGGTTCTCAGCCGGGAGATTACAGATCTCTTGAGAAAGTCTGAAATGAAGCTAAAGAGACTTTCTGCCACTAGTGCGTCCTCTGAGGATTCAAATCTTAGAAAAAATGTGCAGCGTTCCCTTGCTACTGATCTTCAGAACCTCTCTATGGACCTCCGGCGGAAGCAGTCAGCTTATTTGAAACAATTGCAGCAGCAAAAAGAGGGTTATGATGGGGTTGACTTGGAGATGAACCTGACTGGGAACAAATTCGGATTTCAAGATGATGAATTTAGTGATGTGGGTTTCAGTGAACAGCAAATGACAAAGCTAAAGAAAAGTGAGCAGCTATCAgaggaaagggaaagagagattGAACAGGTCACTAAATCAGTTAATGAACTTGCTCAGATCATGAAGGATCTCTCTGTCCTTGTGATAGACCAGGGAACAATTGTTGATAGGATTGATTACAACATTCAGAGTGTCGCTACATCTGTTGAGGAGGGCTTTAAGCAGTTGGAGAAGGCAGAGAGAACGCAAAAAAGAGGAGGAATGGTTACGTGTGCAACAGTGCTTGTTATAATGTGCTTCATCATGCTTGTCCTCTTGATACTCAAGGAGATATTCTTGTA 965 0.4269 MATRNRTIQYRKYRDAVKSVRTPLSSSMPASGGPVIEMVSTSLLRRKQSSYAPLSTEEPGTSRDAFTVGLPPAWVDDSEEIATNIQRARIKMSELVKAHAKALMPSFGDGKEDQHQIEVLSREITDLLRKSEMKLKRLSATSASSEDSNLRKNVQRSLATDLQNLSMDLRRKQSAYLKQLQQQKEGYDGVDLEMNLTGNKFGFQDDEFSDVGFSEQQMTKLKKSEQLSEEREREIEQVTKSVNELAQIMKDLSVLVIDQGTIVDRIDYNIQSVATSVEEGFKQLEKAERTQKRGGMVTCATVLVIMCFIMLVLLILKEIFL 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03061 321 PANTHER SYNTAXIN 1 316 IPR045242 -
Bva04g03061 321 SMART SynN_4 65 181 IPR006011 GO:0016020
Bva04g03061 321 Gene3D - 71 279 - -
Bva04g03061 321 Coils Coil 221 241 - -
Bva04g03061 321 CDD SNARE_syntaxin16 229 286 - -
Bva04g03061 321 ProSiteProfiles t-SNARE coiled-coil homology domain profile. 225 287 IPR000727 -
Bva04g03061 321 Pfam SNARE domain 261 313 IPR000727 -
Bva04g03061 321 SUPERFAMILY t-snare proteins 70 280 IPR010989 GO:0016020|GO:0016192
Bva04g03061 321 PANTHER SYNTAXIN OF PLANTS PROTEIN 1 316 - -
Bva04g03061 321 SMART tSNARE_6 220 287 IPR000727 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03061 Bva-Chr4 25395506 25399570 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03061 1 321 SNARE and Associated Proteins AT5G26980 71.254 2.16e-161 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03061 K08489 - gmx:100803629 493.812