Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03058 ATGCCCGTCGATGCTCATGCCCCTAATCCCAAGGGGCTCCTTTGCAATGCTGGGGCCGGCGCAGCCGCCGGAGTTATTGCTGCTACATTTGTGTGTCCTTTAGATATCATCAAAACTAGGTTTCAGGTTCATGGGCTGCCACAGCTTGCTAGTGGAAGTGCTAAAGGCAGTCTTATAGTtggaagtttggaacaaataGTTCACAAGGAGGGGTTACGTGGCGTGTACCGGGGGCTGGCGCCTACTGTGCTTGCATTACTTCCTAACTGGGCGgtttatttttctatgtatGAGCAGCTCAAGAGCCTTCTTTGCACTGATGATGAATGCCGTCATCTTTCAATTCGAGCTAACATAATCGCTGCTTCTGGTGCTGGGGCTGCAACTACCATTGCTACTAATCCACTTTGGGTTGTCAAGACAAGACTCCAAACCCAGGGAATGAAAACAGGTGTTGTGCCATATAGGGGCACTCTATCTGCtttgagaagaattttttatgagGAAGGCGTTCGGGGATTGTACAGTGGTCTTGTACCTGCTCTGGCTGGTATCAGTCATGTAGCCATCCAGTTTCCAACATACGagacaataaaatttcatttggcTAATCGAGATAGCACAGCAATAGATAAACTCAGTGCACGTGATGTTGCCATTGCCTCATCGGTCTCCAAAATTTTTGCATCCACATTGACATATCCTCACGAGGTTGTACGGTCTAGACTGCAAGAACAAGGACACCACTCTGAGAAGCGGTACTCTGGTGTTATTGACTGTGTAAGGAAGGTATTTCAGCAAGACGGCCTACCTGGTTTTTACCGTGGGTGTGCCACAAACCTTCTGAGGACAACTCCCGCCGCTGTAATCACGTTCACCAGCTTTGAAATGATACACCGGTTTCTTGTCTCACTTTTCCCGCCTGATCCACGGCCTCATATTTTGTG 947 0.4551 MPVDAHAPNPKGLLCNAGAGAAAGVIAATFVCPLDIIKTRFQVHGLPQLASGSAKGSLIVGSLEQIVHKEGLRGVYRGLAPTVLALLPNWAVYFSMYEQLKSLLCTDDECRHLSIRANIIAASGAGAATTIATNPLWVVKTRLQTQGMKTGVVPYRGTLSALRRIFYEEGVRGLYSGLVPALAGISHVAIQFPTYETIKFHLANRDSTAIDKLSARDVAIASSVSKIFASTLTYPHEVVRSRLQEQGHHSEKRYSGVIDCVRKVFQQDGLPGFYRGCATNLLRTTPAAVITFTSFEMIHRFLVSLFPPDPRPHIL 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03058 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Bva04g03058 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 301 IPR018108 -
Bva04g03058 315 Pfam Mitochondrial carrier protein 218 303 IPR018108 -
Bva04g03058 315 Pfam Mitochondrial carrier protein 13 106 IPR018108 -
Bva04g03058 315 Pfam Mitochondrial carrier protein 113 204 IPR018108 -
Bva04g03058 315 Gene3D Mitochondrial carrier domain 111 305 IPR023395 -
Bva04g03058 315 PRINTS Mitochondrial carrier protein signature 16 29 IPR002067 GO:0055085
Bva04g03058 315 PRINTS Mitochondrial carrier protein signature 78 98 IPR002067 GO:0055085
Bva04g03058 315 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085
Bva04g03058 315 PRINTS Mitochondrial carrier protein signature 29 43 IPR002067 GO:0055085
Bva04g03058 315 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085
Bva04g03058 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 2 314 IPR044712 GO:0006862|GO:0055085
Bva04g03058 315 PANTHER NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1, CHLOROPLASTIC 2 314 - -
Bva04g03058 315 Gene3D Mitochondrial carrier domain 3 110 IPR023395 -
Bva04g03058 315 SUPERFAMILY Mitochondrial carrier 10 297 IPR023395 -
Bva04g03058 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 11 103 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03058 Bva-Chr4 25378174 25382573 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03058 1 309 Chloroplast and Mitochondria Gene Families AT2G47490 75.728 4.64e-167 465
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03058 K15115 - jre:108994143 523.857