Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03056 ATGTCTAACGTTGAGTCGAATGGTGGCGTTTGCTATTATTCAGTACTTCAAATACGCAAACAGGCAACCGACGACGAAATTCGAGGCGCTTACCGGCAGATGGCTCTGAAATGGCATCCTGATAGGTGGACCAAAGACCCTAAGGTTGCTATAGAAGCTAAAACACGGTTTCAGCAAATTCAGGAGGCTTATTCGGTATTGTCCAATAAAGAGAAGAGGACGATATATGACGCCGGCCTGTTTGGTCTAGTTGGAGAGGACGATGATGAGGGGTTTGTTGATTTCATGCAAGAAATGGTGTTAATGATGAAGAGAGTGAAGCCCAAGGATGAGAAAGAAGTGTTTGAAGATCTCCAGGGACTGCTAATGGAGATGATGAGAGACAACGAAGCGATTGCCAAATCTGGGTTGAACTGGAACTCATCCACTTGTCCAAGAAAAAGGACTCGTTTTACtctata 461 0.4425 MSNVESNGGVCYYSVLQIRKQATDDEIRGAYRQMALKWHPDRWTKDPKVAIEAKTRFQQIQEAYSVLSNKEKRTIYDAGLFGLVGEDDDEGFVDFMQEMVLMMKRVKPKDEKEVFEDLQGLLMEMMRDNEAIAKSGLNWNSSTCPRKRTRFTL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03056 153 ProSitePatterns Nt-dnaJ domain signature. 57 76 IPR018253 -
Bva04g03056 153 PANTHER DNAJ HOMOLOG SUBFAMILY B MEMBER 6-LIKE 5 151 - -
Bva04g03056 153 PANTHER PUTATIVE, EXPRESSED-RELATED 5 151 - -
Bva04g03056 153 SMART dnaj_3 10 72 IPR001623 -
Bva04g03056 153 Pfam DnaJ domain 12 77 IPR001623 -
Bva04g03056 153 ProSiteProfiles dnaJ domain profile. 11 80 IPR001623 -
Bva04g03056 153 CDD DnaJ 11 69 IPR001623 -
Bva04g03056 153 Gene3D DnaJ domain 2 91 IPR036869 -
Bva04g03056 153 PRINTS DnaJ domain signature 13 31 IPR001623 -
Bva04g03056 153 PRINTS DnaJ domain signature 52 72 IPR001623 -
Bva04g03056 153 PRINTS DnaJ domain signature 31 46 IPR001623 -
Bva04g03056 153 SUPERFAMILY Chaperone J-domain 10 99 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03056 Bva-Chr4 25365232 25366323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03056 11 78 C2H2 Transcription Factor Family AT1G74250 43.478 2.39e-13 64.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03056 - - gmx:100794942 234.187