Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03039 ATGGCTTTCAAGTTCTTCACCGTTCTCGCTTTCTTGTTTACAATTCTGCTTTCCATCTTTGCTTCATTAGCAATTGCAGATCCCCAAGAAACCATTTGCAGCTCCACCATGGACCCTTCTTATTGCAAGAATGCGTTTGCTAATCAACATGGTCGCAATGTCTATGACTATGGCCGCATTTCTTTTCGAAAATCCCTATCACAGTCCCGCAAGTTCTTGAACTTAGTGGACTCGTACCTTCAATCAAGCTCCTCCTTTTCCCAACCTCTCGTTCGCGCTCTTGAAGATTGTCGCTTCCTTGCTCAACTAAACTTCGACTATTTGTCAAACAGCTGTGACATTGTCAACAAAACAAGCAATGCACTTGCCAGTTCACAAGCTGAAGATATGCAAACCTCACTTAGTGCCATTTTGACAAACCAACAAACTTGTTTAGAAGGGTTGGAGACTGTTGCTTCGGGTTCAAGAGTGAAGAATGAGCTTTCACTTCCTCTCTCTGATGACACTAAACTTCACAGTCTGTCGCTGGATATCTTTGTTAAAGGGTGGGTGCCTGAGAAGAAGATTGCAACATCATGGGCACACAATGGGAGACACTTGGGTTTCCGAAATGGTCATTTACCATTGAAGATGTCCAAGCGAGTTCGTGCCATTTATGATTCCGCGAGAGGGCGCCACACCCACAGGCACGGGAAGAAACTACTTCAGGCTGAGGATGGCCAGGAAAGTGTCCTGATTCAGGATATTGTGGTTGTTTCTCAGGATGGAAGCGGTAACTTCACCACCATCAACGCTGCTATTGCTGCGGCACCCAATAACACTGATGCAACTGATGGAtactttttgatatatatcacTGAGGGTGTGTATCAAGAATATGTGTCCATAGATAAAAAGAAGACTTACTTGATGCTCATCGGAGAGGGAATCAATCGGACAATCATCACAGGAGATCGAAATGTTGTCGACGGGTTCACAACATTCAATTCAGCAACATTTGCTGTAGTAGCCCCAGGGTTTGTTGCCGCCGGAATAACATTCCGCAACACTGCGGGGCCAAACAAGCACCAAGCCGTTGCAATGAGAAGCGGAGCAGACATGTCCACATTCTATAGCTGCAGCTTTGAAGGGTACCAAGACACTCTCTATACACATTCCAACAGACAATTTTACAGAGAATGTGACATCTACGGCACAGTTGACTTCATATTCGGAAACGGTGCAGCTGTTCTTCAAAATTGCAACATCTATCCACGCCTACCCTTGAGTGGTCAATTCAACGCCATCACTGCACAAGGTCGAACCGAACCGAATCAGAACACGGGCATTTCTATCCAAAATGCTACTATAAGGGCTGCTGATGACTTGGCTCCAAACGTCGGTTCTGTGAACACGTACCTTGGGAGGCCATGGAAGCAATATTCGAGGACTGTGTATCTGCAGTCTTTCATGGATAGTTTGATTAATGCTGCTGGTTGGCGTGAATGGAATGGTGATTTCGCACTCAGCACATTGTACTATGCAGAGTATAGTAACACGGGGCCTGGTTCGAGCACTTCTAACAGAGTAACATGGCCCGGTTACCATGTTATTGGGGCGACAGAAGCCGCTAACTTTACAGTGTCTAATTTTGTGGCAGGGGATGATTGGCTGCCCCGAACTGGAGTCCCATACTTGAGTGGATTAATATA 1691 0.4548 MAFKFFTVLAFLFTILLSIFASLAIADPQETICSSTMDPSYCKNAFANQHGRNVYDYGRISFRKSLSQSRKFLNLVDSYLQSSSSFSQPLVRALEDCRFLAQLNFDYLSNSCDIVNKTSNALASSQAEDMQTSLSAILTNQQTCLEGLETVASGSRVKNELSLPLSDDTKLHSLSLDIFVKGWVPEKKIATSWAHNGRHLGFRNGHLPLKMSKRVRAIYDSARGRHTHRHGKKLLQAEDGQESVLIQDIVVVSQDGSGNFTTINAAIAAAPNNTDATDGYFLIYITEGVYQEYVSIDKKKTYLMLIGEGINRTIITGDRNVVDGFTTFNSATFAVVAPGFVAAGITFRNTAGPNKHQAVAMRSGADMSTFYSCSFEGYQDTLYTHSNRQFYRECDIYGTVDFIFGNGAAVLQNCNIYPRLPLSGQFNAITAQGRTEPNQNTGISIQNATIRAADDLAPNVGSVNTYLGRPWKQYSRTVYLQSFMDSLINAAGWREWNGDFALSTLYYAEYSNTGPGSSTSNRVTWPGYHVIGATEAANFTVSNFVAGDDWLPRTGVPYLSGLI 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03039 563 Pfam Plant invertase/pectin methylesterase inhibitor 30 159 IPR006501 GO:0004857
Bva04g03039 563 ProSitePatterns Pectinesterase signature 2. 396 405 IPR033131 -
Bva04g03039 563 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 31 179 IPR035513 -
Bva04g03039 563 Gene3D Invertase/pectin methylesterase inhibitor family protein 29 181 IPR035513 -
Bva04g03039 563 Pfam Pectinesterase 250 548 IPR000070 GO:0030599|GO:0042545
Bva04g03039 563 SUPERFAMILY Pectin lyase-like 247 561 IPR011050 -
Bva04g03039 563 Gene3D - 244 562 IPR012334 -
Bva04g03039 563 PANTHER PECTINESTERASE 13 561 - -
Bva04g03039 563 PANTHER PECTINESTERASE/PECTINESTERASE INHIBITOR 13 561 - -
Bva04g03039 563 CDD PMEI-like_3 31 179 - -
Bva04g03039 563 SMART PMEI_2 23 178 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03039 Bva-Chr4 25303764 25305579 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03039 8 563 Carbohydrate Esterase AT1G02810 60.174 0.0 695
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03039 K01051 - gmx:100813051 801.201