Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03037 atgaagtccattgcaaaaattttgttcatctCCGCCGTGTGCCTCCTATTTGTTCCTCAGCAAACAGGCGCAGAAGAAGTGAAAGGCAAGAGTCTAATCGAAAAGGTGTGCCAAGGTACGAATGCCAAAGATCTATGCACCGCCATTCTCTTATCAGACCCAAGAAGCCTGCAAGAAACCGAAAATGGCCTAGCAATGATAGCACTGAACGTGGCTAGCAAAAACGCCACCGACATAATAAACCACGTGAAGGTGTTGGATGGCGATGACAGTTTGGATCCCAATGTGGAACAGGCCTTGAATGATTGCCAAGACACGTTCGAAGACGCACAAGACCAGATTACCGATGCTATTGGTTCCCTTGTGGCAGGTAACACCAAAGACGCTCAGAAATGGCTCCAAGCTGGATTGGCTGCCAGCGATACCTGCGAGAATTCTCTCCGTGGAAATGAACATATCCTCTTGAACAAGACCGAAACGTTTCGCAAGTTGTGCAGCATTGCCTTATCCATCATCCAGAACTTGCCTTCCTCCAagtg 539 0.4564 MKSIAKILFISAVCLLFVPQQTGAEEVKGKSLIEKVCQGTNAKDLCTAILLSDPRSLQETENGLAMIALNVASKNATDIINHVKVLDGDDSLDPNVEQALNDCQDTFEDAQDQITDAIGSLVAGNTKDAQKWLQAGLAASDTCENSLRGNEHILLNKTETFRKLCSIALSIIQNLPSSK 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03037 179 Pfam Plant invertase/pectin methylesterase inhibitor 31 171 IPR006501 GO:0004857
Bva04g03037 179 PANTHER PECTINESTERASE 6 167 - -
Bva04g03037 179 SMART PMEI_2 28 171 IPR006501 GO:0004857
Bva04g03037 179 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 6 167 - -
Bva04g03037 179 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 30 175 IPR035513 -
Bva04g03037 179 Gene3D Invertase/pectin methylesterase inhibitor family protein 28 175 IPR035513 -
Bva04g03037 179 TIGRFAM PME_inhib: pectinesterase inhibitor domain 7 175 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03037 Bva-Chr4 25296291 25297158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03037 28 147 Carbohydrate Esterase AT5G53370 25.806 2.76e-07 47.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03037 - - pvu:PHAVU_001G208600g 131.724