Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03036 ATGGATGCAGAGACACACGCAAGGTATGCCCAGAACGGCGAGGTCATGCTCGCCTCGGCCATCCTCTTATTCTTCGTAATACTCACCATCATTTTTCTTCGAACATTTGGTCACTTCTGCATACGTCACCGCCGTCATAGCGGTCGATTCTACCCTCGTATCATAATTCCCAATACCTCCTCCGTAAGGGCCGCCAACACATTTACCGCTGCTTACAGCAAGCCACTCGAATTTTCCATTCTAAAATTGCTTCCCACCTTCACTTACTCCTCCGTGAGCCATCCACCGATGCAGGAGTGTGCCGTCTGCTTATCGGAGTTCGAAGACGACGACGAGGGTCGTGTCCTCCCAAGCTGTAACCACGCCTTCCACTCTCAATGTATCGACACATGGTTCCTCTCCCACTCTAACTGCCCGCTCTGTCGAGCCCCGGTTCGACCGCCTAAAATTGGACCGGTTGTTGACCCGATTCGTTCCCCTTTTGATTCGAGTCAAGCCGGTTGCTCGACTCTACCTCCGCCGATTGGGTGCCCGAGAAAGCCATTAGATCTGGTAGAGATGGTGGGCGTAATAGTAGAGTTGCCTTCGGCtccagagaagagaagaacttG 611 0.5123 MDAETHARYAQNGEVMLASAILLFFVILTIIFLRTFGHFCIRHRRHSGRFYPRIIIPNTSSVRAANTFTAAYSKPLEFSILKLLPTFTYSSVSHPPMQECAVCLSEFEDDDEGRVLPSCNHAFHSQCIDTWFLSHSNCPLCRAPVRPPKIGPVVDPIRSPFDSSQAGCSTLPPPIGCPRKPLDLVEMVGVIVELPSAPEKRRT 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03036 203 PANTHER RING-H2 FINGER PROTEIN ATL64 5 147 - -
Bva04g03036 203 SMART ring_2 100 141 IPR001841 -
Bva04g03036 203 Pfam Ring finger domain 99 142 IPR001841 -
Bva04g03036 203 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 5 147 - -
Bva04g03036 203 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Bva04g03036 203 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 148 IPR013083 -
Bva04g03036 203 CDD RING-H2_PA-TM-RING 99 142 - -
Bva04g03036 203 SUPERFAMILY RING/U-box 82 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03036 Bva-Chr4 25294268 25295233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03036 9 145 Rapid Response to Elicitors AT3G16720 41.844 1.69e-31 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03036 - - gmx:102665377 181.8