Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03024 ATGCTAGGGGTTTATAATACACTGGGGCATGAAAAATGTGAAAGCTGCTTATTATTTAGGGGTGAAACAGCCCTTGGGAATACCTTTCGAGCagttttgtgttttcttgGTCTTGCTTATTGTTTCCTTGGATTATCAGCTATAACTGCGCGCTTCTTCCGCTCTATGGAGAATGTTGTCAATCACACAAGGGAGGTAGTGGAGATAGATCCCTGTACACATGCCAAAATTATCAGGCATGAAAAAGTGTGGAATTACACAATCGTGGATATTAGTCTGCTAGCCTTTGGTACTAGCTTTCCTCAGATATCACTAGCCACCATTGATGCTATAGGAAACATGGGGAATCTTTATGCTGGAGGTTTGGGTCCTGGAACACTTGTTGGTTCTGCTGCATTCGACCTTTTCCCTATCCATGCTGTTTGTGTAGTAGTTCCGAAAGCTGGAGAGCTCAAAAAGATTACGGACATAGGAGTATGGCTGGTGGAGCTGTTTTGGTCCTTTTGGGCTTACATTTGGTTGTACATCATTTTGGAGGTATGGACTCCAAATGTGATTACTCTATGGGAGGCCCTGTTGACGGTACTTCAGTATGGGTTACTGTTAGCTAGTGCTTATGCTCAAGACAAACGTTGGCCCTATATTTCTTTGCCCATTTCAAGAGGTGAGAGGCCAGAGGAGTGGGTGCCAGAAGAGACAGCTTGTTACAATGAAGAGTACGGGGAATATTTTGAGATAACtcatgatgatgaagaaaacaagggAGTTGTCGATATTTTCTCCATTCATTCAAAAAATCAGAACGACCCTATGTACGTAAGGGTACCTCAAACAGCTGATGCTGCCGAAACTTCCGACagtgaaaatgaaatgttGGAAGAGACACATTTGCTTACACTTTGGAAACAGCAATTTGCGGATGCACTGACgTTGGAGAGCAAAGAATCAGCTAAACTGAGTAATATTTTTCTCCGCGTAGCTAAAATTTGTTGGCAGATGCTGCTTTTGCCATGGAGACTTCTGTTTGCTTTTGTCCCTCCATGTCAAATTGTTCATGGTTGGGTTTCTTTCATCTGCTCTCTGCTTTTCATCAGTGGGATTGCTTACATTGTGACTAAGCTCACCGATGTTATAAGCTATGTCACAGGAATAAATGCTTACGTCATTGCATTTACGGCGCTAGCCAGTGGAACCTCGTGGCCAGATTTAGTGGCGAGCAAGATTGCTGCTGAACGTCAATTAACTGCAGACTCCGCCATTGCAAACATCATTTGCAGTAATTCAGTGAATATATATGTGGGCATTGGTGTTCCATGGCTGATTGACACTTTATACAACTTTGTAGCATATAGAGAACCACTCCGGATTAATAATGCAAACGGCCTAAGCTTTTCTttgattgttttcttctgCACTTCTGTTGGGTGCATCACAGTTTTGGTATTTAGGCGTCTAGTTTTTGGTGCAGAGCTAGGAGGACCAAGGCTCTGGGCATGGATTACCTGTGTCTACTTCATGTTGCTttggattatttttgttgtcgTATCTTCACTCAAGGTTTCCGGTATCATTTA 1574 0.4072 MLGVYNTLGHEKCESCLLFRGETALGNTFRAVLCFLGLAYCFLGLSAITARFFRSMENVVNHTREVVEIDPCTHAKIIRHEKVWNYTIVDISLLAFGTSFPQISLATIDAIGNMGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKITDIGVWLVELFWSFWAYIWLYIILEVWTPNVITLWEALLTVLQYGLLLASAYAQDKRWPYISLPISRGERPEEWVPEETACYNEEYGEYFEITHDDEENKGVVDIFSIHSKNQNDPMYVRVPQTADAAETSDSENEMLEETHLLTLWKQQFADALTLESKESAKLSNIFLRVAKICWQMLLLPWRLLFAFVPPCQIVHGWVSFICSLLFISGIAYIVTKLTDVISYVTGINAYVIAFTALASGTSWPDLVASKIAAERQLTADSAIANIICSNSVNIYVGIGVPWLIDTLYNFVAYREPLRINNANGLSFSLIVFFCTSVGCITVLVFRRLVFGAELGGPRLWAWITCVYFMLLWIIFVVVSSLKVSGII 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03024 524 Pfam Sodium/calcium exchanger protein 35 205 IPR004837 GO:0016021|GO:0055085
Bva04g03024 524 Pfam Sodium/calcium exchanger protein 352 516 IPR004837 GO:0016021|GO:0055085
Bva04g03024 524 PANTHER SODIUM/CALCIUM EXCHANGER 268 524 - -
Bva04g03024 524 Gene3D - 86 222 IPR044880 -
Bva04g03024 524 Gene3D - 313 518 IPR044880 -
Bva04g03024 524 PANTHER SODIUM/CALCIUM EXCHANGER 6 212 - -
Bva04g03024 524 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 6 212 - -
Bva04g03024 524 PANTHER NA/CA-EXCHANGE PROTEIN, ISOFORM G 268 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03024 Bva-Chr4 25243192 25246865 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03024 6 524 Antiporters AT2G47600 70.342 0.0 757
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03024 K03452 - gmx:100792839 841.262