Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03023 ATGAGCCGCGGAGCAGCAACTGGGGCGAAGGGTAAGAAGAAGGGAGCAAGCTTCGTAATAGATTGTGCGAAGCCGGTGGAAGATAAGATCATGGACATCGCCTCACTGGAGAAGTTTCTTCAGGAGAGGATTAAAGTGGGAGGCAAAGCTGGTGCATTGGGTGATTCAGTAACCGTCACCCGTGACAAGAGCAAGATCACAGTTACCTCTGACAGCAACTTCTCCAAAAGGTATCTGAAATACTTAACTAAGAAGTACTTGAAGAAGCACAATGTGAGGGATTGGCTTCGGGTGATAGCCTCCAACAAGGACCGGAATATCTATGAATTAAGATACTTCAACATTGCTGAGAATGAGGGTGAGGAGGAAGACTG 374 0.4706 MSRGAATGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTRDKSKITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03023 124 PANTHER 60S RIBOSOMAL PROTEIN L22-2 1 124 - -
Bva04g03023 124 Gene3D - 5 124 IPR038526 -
Bva04g03023 124 Pfam Ribosomal L22e protein family 14 122 IPR002671 GO:0003735|GO:0005840|GO:0006412
Bva04g03023 124 PANTHER 60S RIBOSOMAL PROTEIN L22 1 124 IPR002671 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03023 Bva-Chr4 25237045 25238714 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03023 1 124 Cytoplasmic Ribosomal Protein Gene Family AT3G05560 87.903 2.80e-68 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03023 K02891 - gmx:100500073 218.009