Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03012 ATGTCCTCTGCAACTTGGATCTCGTCCCTCTCATGTTCTTTACCCGCGACAGGAACCTCAGGAAAGACGTTTGTTTTAACTCTTCCTCAGTGGCTAAGATTTGTTTTCCTCTCTCCCTGTCCTCAGAGAGCTCTGTTGTCTGCTGTTGACATTTTACTCCTGCTCATCCTGTTTGTCTTTTCCCTTAAGAAGCTCTATTCGAGGTTCACCTCCAATGGCGACCCCATCTCTGAACTCGGCAAGCCCCTAATCAGAAATGACAGAGCTTATGCTAGAACGGCAATATGGTTTAAGCTTACTCTATCTGCAACGGCTTTTCTGGCTATTTTGTACACTATCGCATGCATTCTGGTATTCAGCAGAGCCACCCAAGTGCCATGGAAGTTAGTTGATGGGCTATTTTGGTTGGTTCAGGGCTTAACGCATGCGGTGCTCTCAGTGTTAATCATCCACGAAAGAAGATTTCAAGCTGAGAATCACCCAACATCACTCCGCATTTTCTGGATTGCCAACTTCATTCTCATTTCACTGTTTACAGCGTCTGGGGTTATACGTTTTGTCACAGTGGAACAAACCCAAGACTTCAGCTTTAAAGTCGATGATAtggtttctttcatttcttttcctctgtCACTCTTTCTCCTCTTGGTTGCTATTAAAGGAACAACCGGCATCATGTCCACTGAAAAAGCCCAACCACTTATTGATGATGATACTACTCAGAGCAAATCCATTGTTACAGGCTTCGCTTCGGCTTCTGTAGTATCGAAGGCCTTATGGCTTTGGATGAACCCATTACTGAGTAAAGGGTACAAGTCATCGCTCAATATTGATGAAGTCCCTTTACTTTCCCCAGAACACAGAGCAGAAAGAATGTCAGCTCTGTTCGAATCAAAATGGCCTAAGCCGCAAGAAATGTCAAAGCACCCAGTTCGAACCACATTGCTCCGATGCTTCTGGAAAGAACTAGCCTTTACTGCTTTCCTTGCAGTTGTTCGTCTCTGTGTAATGTTCGTGGGTCCAATTCTTATACAGAGCTTCGTTGACTACACAGCAGGGAAGAGAAACTCTGTATATGAAGGATATTACCTCGTGTTGATTCTTCTCGTTGCAAAATTCATAGAAGTGTTGGCCACTCACCATTTCAACTTCAACTCTCAGAAGCTTGGAATGCTTATTAGGTGCACTCTTATCACTTCTCTGTTCAAGAAAGGGCTACGGCTATCATGCTCTGCTAGGCAGGAACATGGGGTTGGAGCTATAGTTAATTACATGGCTGTTGATTCTCAACAACTCTCTGATATGATGCTTCAGCTACATGCTCTGTGGATGATGCCATTTCAAGTTAGTATTGCCTTATTTTTGCTTTACCGGTATCTGGGTTCCTCTGTCGTTACAGCGTTGCTTGGAGTTTTTGGTATTCTCTTGTTTGTTGTGTTTGGTAGTAAAAGAAACAACCGTTTCCAATTCAACGCAATGAAGAGTCGTGATTCGAGAATGAAAGCTGTGAATGAGATGCTTAATTGCATGCGTGTGATAAAGTTCCAGGCATGGGAAGAGCATTTTAACAATAGAATTCTGGGTTTCCGTAAATCAGAATTTGGATGGATTTCCAAGTTTCTGTACTCAGTTTCTGGCAATATTATAGTGATGTGGAGTACGCCATTACTGATATCGACTCTCACGTTTGCTACAGCAATTTGGTTCGGAGTTCCACTTGATGTAGGCACGGTTTTTACGACTACAACAATTTTCAAAACCTTGCAGGAACCCATTAGGGCCTTCCCACAGTCTATGATTTCTCTTTCACAAGCGATGATATCACTGGGTAGACTAGATAAGTACATGATGAGTAGAGAATTGTCAAATGATTCGGTGGAGAGAGAAGGTTGTGGCGGGGGAATTGCTGTGGAGGTCCAAGATGGGATCTTTAGCTGGGATGATGAGAATGGGGAACGGGActtgaaaaatatcaatttgaaGATCAGAAAAGGGGAGCTTACAGCTGTTGTTGGAACTGTGGGCTCTGGAAAATCTTCTCTCCTATCATCAATTCTTGGTGAGATGCACAGAATTTCCGGAAAGGTTCGAGTTAGTGGGAGCACTGCCTACGTAGCACAGACATCGTGGATTCAAAATGGGACCATTCAGGAGAACATCCTCTATGGTTTACCAATGGACAGACAGAAGTACGAGGAGGTAATCAGGGTTTGTTGTTTGGAAAAAGACTTGGAAATGATGGAGCATGGAGATCAAACGGAGATAGGAGAGCGTGGCATCAACCTTAGTGGGGGTCAGAAGCAGCGGATACAACTTTGCAGGGCCGTATATCAAGACTGTGACATATATCTTCTCGATGATGTCTTTAGTGCTGTCGATGCACACACTGGCTCTGAAATATTCAAGGAATGTGTGAGGGGAGCTCTCAAAGGAAAGACTGTTATTCTTGTAACTCACCAAGTAGACTTCTTGCATAATATTGATCTTATACTGGTGATGAGGGATGGAATGATAGTCCAATCCGGGAAGTACAATGATCTACTAGATTCTGGGATGGATTTTAAAGCTCTTGTTGCTGCACATGAAACCTCAATGGAACTAGTAGAACAAGGTACAGTAACAGCTGGTGAAAATTCTCCCAGACCAGACAAGTCTCCAAGGGCAGCTTCTAATCATGGGGAAACCAACGGCGAAAGCAACTCCCTCTCCCTCGACCAGGCCAAATCTGGGAAACAAAGCTCTAAACTCATCAAAGAAGAGGAAAGAGAAACTGGCAAAGTGAGCTTGCATATCTATAAACTCTACTGCACCGAGGCTTTTGGTTGGTGGGGTTTTATAGGAGGAttgcttgtttctttgttaTGGCAAGCATCTCTAATGGCGAGTGACTATTGGTTGGCATATGAAACCTCGGAAAAGAACGCTCAATTCTTCAGCCCTTCTCAGTTTATTTCCGTCTATGCAATTATAGCTGCAGTTTCTGTTGTTCTGATTGTGGTAAGAGTCTTCTCCTTTACAATCATGGGGCTTAAGACAGCACAAATTTTCTTCACGCAAATTCTCCATAGCATCTTGCACGCCCCCATGTCCTTCTTTGACACTACACCTTCAGGAAGAATTCTAAGTAGGGCATCCACCGATCAGTTCAATGTTGATGTGCTCCTCCCCTTCTTCGTGAGCATTGTCATTGCTCTGTACATTACAGTGGTCagcatcttcatcatcacatGTCAAAATTCTTGGCCAACAGTGTTCCTGTTAATTCCTCTTGTTTTGTTGAATATATGGTACCGGGGTTATTTCCTTGCTTCATCTCGCGAATTAACTCGACTAGATCAAATCACAAAGGCACCTGTCATTCACCATTTCTCAGAAAGCATCTCAGGGGTAATGACAATCCGTGCATTCAGAAAGCAGGAGACgtttattgaagaaaatgtTAGAAGAGTGAATGACAATTTGCGAATGGATTTCCATAACAATGGTTCCAATGAGTGGTTGGGTTTCCGTTTAGAATTTCTTGGAAGCttagttttctgtttttctgccTTGTTCATGATCATGTTACCCAGCAGCATCATAAAGCCAGAAAACGTGGGTTTATCACTGTCTTATGGATTGTCCCTAAATGCTGTCCTGTTCTGGGCTACATACGCGAGCTGTTTCATCGAGAACAAAATGGTATCTGTTGAGAGGATAAAGCAGTTCACAAAAATTCCATCAGAAGCAGCATGGAATCTTAAAGATCGTCTTCCTTCTCCAAATTGGCCTGCCCATGGTGATGTTGATGTCAAAGACTTGCAGGTCAGATATCGTCCAAACACTCCTCTGGTTCTTAAAGGCCTAACATTGAGCATTATTGGGGGAGAAAAGATCGGCGTTGTTGGTCGAACTGGTAGCGGAAAATCAACTCTGATTCAAGTATTCTTTAGGCTGGTGGAACCTTCAGGAGGGAAAATAGTTATTGATCGCATTGACATATCTGCATTGGGGCTTTATGATCTTAGATCTCGGTTTGGCATTATTCCCCAAGAGCCTGTCCTTTTTGAAGGAACTGTCAGAAGCAACATTGACCCAATTGGACAATACACTGACGAAGAGATATGGAAGAGTCTGGAACGCTGTCAACTAAAAGATGCAGTGGCAGCTAAGCCTGAGAAACTCGACTCTTTAGTGGTTGATAACGGAGAGAACTGGAGTGTTGGGCAGAGGCAGTTGCTCTGTCTGGGGCGGGTTATCCTCAAACGAAGCCGGCTCTTGTTTATGGATGAAGCAACAGCTTCTGTTGATTCTCAAACTGATGCTGTAATTCAGAAGATCATCAGAGAGGATTTTGCGGCTTGTACCATCATCAGCATTGCTCACAGAATACCTACAGTAATGGACTGTGACAGGGTTCTAGTAATAGATGCAGGGCGGGCAGAAGAATTTGACAAACCCTCTCACCTGCTTCAGAGACAATCACTATTTGGGGCATTAGTGCAGGAATATGCCAACCGTTCCTCTGGATTATA 4514 0.4262 MSSATWISSLSCSLPATGTSGKTFVLTLPQWLRFVFLSPCPQRALLSAVDILLLLILFVFSLKKLYSRFTSNGDPISELGKPLIRNDRAYARTAIWFKLTLSATAFLAILYTIACILVFSRATQVPWKLVDGLFWLVQGLTHAVLSVLIIHERRFQAENHPTSLRIFWIANFILISLFTASGVIRFVTVEQTQDFSFKVDDMVSFISFPLSLFLLLVAIKGTTGIMSTEKAQPLIDDDTTQSKSIVTGFASASVVSKALWLWMNPLLSKGYKSSLNIDEVPLLSPEHRAERMSALFESKWPKPQEMSKHPVRTTLLRCFWKELAFTAFLAVVRLCVMFVGPILIQSFVDYTAGKRNSVYEGYYLVLILLVAKFIEVLATHHFNFNSQKLGMLIRCTLITSLFKKGLRLSCSARQEHGVGAIVNYMAVDSQQLSDMMLQLHALWMMPFQVSIALFLLYRYLGSSVVTALLGVFGILLFVVFGSKRNNRFQFNAMKSRDSRMKAVNEMLNCMRVIKFQAWEEHFNNRILGFRKSEFGWISKFLYSVSGNIIVMWSTPLLISTLTFATAIWFGVPLDVGTVFTTTTIFKTLQEPIRAFPQSMISLSQAMISLGRLDKYMMSRELSNDSVEREGCGGGIAVEVQDGIFSWDDENGERDLKNINLKIRKGELTAVVGTVGSGKSSLLSSILGEMHRISGKVRVSGSTAYVAQTSWIQNGTIQENILYGLPMDRQKYEEVIRVCCLEKDLEMMEHGDQTEIGERGINLSGGQKQRIQLCRAVYQDCDIYLLDDVFSAVDAHTGSEIFKECVRGALKGKTVILVTHQVDFLHNIDLILVMRDGMIVQSGKYNDLLDSGMDFKALVAAHETSMELVEQGTVTAGENSPRPDKSPRAASNHGETNGESNSLSLDQAKSGKQSSKLIKEEERETGKVSLHIYKLYCTEAFGWWGFIGGLLVSLLWQASLMASDYWLAYETSEKNAQFFSPSQFISVYAIIAAVSVVLIVVRVFSFTIMGLKTAQIFFTQILHSILHAPMSFFDTTPSGRILSRASTDQFNVDVLLPFFVSIVIALYITVVSIFIITCQNSWPTVFLLIPLVLLNIWYRGYFLASSRELTRLDQITKAPVIHHFSESISGVMTIRAFRKQETFIEENVRRVNDNLRMDFHNNGSNEWLGFRLEFLGSLVFCFSALFMIMLPSSIIKPENVGLSLSYGLSLNAVLFWATYASCFIENKMVSVERIKQFTKIPSEAAWNLKDRLPSPNWPAHGDVDVKDLQVRYRPNTPLVLKGLTLSIIGGEKIGVVGRTGSGKSTLIQVFFRLVEPSGGKIVIDRIDISALGLYDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYTDEEIWKSLERCQLKDAVAAKPEKLDSLVVDNGENWSVGQRQLLCLGRVILKRSRLLFMDEATASVDSQTDAVIQKIIREDFAACTIISIAHRIPTVMDCDRVLVIDAGRAEEFDKPSHLLQRQSLFGALVQEYANRSSGL 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03012 1504 CDD ABC_6TM_ABCC_D1 325 612 IPR044746 GO:0140359
Bva04g03012 1504 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524
Bva04g03012 1504 Gene3D - 617 878 IPR027417 -
Bva04g03012 1504 PANTHER ABC TRANSPORTER C FAMILY MEMBER 4 88 1503 - -
Bva04g03012 1504 CDD ABC_6TM_ABCC_D2 945 1237 IPR044726 GO:0140359
Bva04g03012 1504 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 860 IPR003439 GO:0005524
Bva04g03012 1504 SMART AAA_5 664 845 IPR003593 -
Bva04g03012 1504 SMART AAA_5 1288 1481 IPR003593 -
Bva04g03012 1504 SUPERFAMILY ABC transporter transmembrane region 942 1242 IPR036640 GO:0005524|GO:0016021
Bva04g03012 1504 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 324 604 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g03012 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1255 1495 IPR027417 -
Bva04g03012 1504 Pfam ABC transporter 655 788 IPR003439 GO:0005524
Bva04g03012 1504 MobiDBLite consensus disorder prediction 889 911 - -
Bva04g03012 1504 CDD ABCC_MRP_domain1 637 836 - -
Bva04g03012 1504 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1262 1496 IPR003439 GO:0005524
Bva04g03012 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 636 858 IPR027417 -
Bva04g03012 1504 Pfam ABC transporter 1279 1427 IPR003439 GO:0005524
Bva04g03012 1504 SUPERFAMILY ABC transporter transmembrane region 315 616 IPR036640 GO:0005524|GO:0016021
Bva04g03012 1504 Gene3D - 1246 1495 IPR027417 -
Bva04g03012 1504 MobiDBLite consensus disorder prediction 871 917 - -
Bva04g03012 1504 Gene3D ABC transporter type 1, transmembrane domain 313 616 IPR036640 GO:0005524|GO:0016021
Bva04g03012 1504 Gene3D ABC transporter type 1, transmembrane domain 907 1243 IPR036640 GO:0005524|GO:0016021
Bva04g03012 1504 Pfam ABC transporter transmembrane region 325 591 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g03012 1504 Pfam ABC transporter transmembrane region 952 1190 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g03012 1504 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 946 1225 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g03012 1504 CDD ABCC_MRP_domain2 1260 1480 - -
Bva04g03012 1504 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 88 1503 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03012 Bva-Chr4 25187943 25194771 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03012 637 1495 Calmodulin-binding Proteins AT2G36910 24.759 8.58e-62 231