Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g03006 ATGGTTGAAACCAGACGCAGCTCCTCTTCTTCTAAGCGCTCTCTGTCTTCACCTCCTCCTACCAACGCCAAACGATCCaagGTGTCCGAGGATGCGTCATCTACAACTCTGCCGTCACCGGAAATTCTTGATCCGGTCAACGAATCTCGAAATGAATCTCGAGAACTGGAGATACCGTCGTCTGATCTGCCGGATACCGATTCTTTGAAGGCTGTAGACCCATTTGATGCGATGTTACCTGAAAAATCTCCTGCTGTGCCTGTAGAAGACAAAGCCTTGGTGTCTCCGCAGTCTTTAGGCGAAACTGCTGTGGATGCGGAGAAACCGAAGGTTGTACGCACGGCGGCGCTTCGTCGGTCAAAGAAACGGTCaaccaaatccaaaaaatCGACCTCCACGGTGGCATGGGGAAAACTCCTTTCTCAGTCTTCTCAGAATCCTCACCTGTCTATGTATGATTCTCCCTTCACTGTTGGTCAAGGCAATCGTTGTAATTTGTGTATTAAAGATCCAGATGTTAGTAACATCTTGTGCAAATTGAAGCACATAGAGCATGGAGGTTCATCTGTTGCTTTACTGGAAATCTCTGGTTGTAAAGGTGTTGTCCAAGTTAATGGCAAGATTCACCGAAAAAATTCCCGTGTGCTTCTAAGTGGTGGTGATGAGGTGGTCTTCAGTTCTTCTGGCAAAAACGCTTATATTTTCCAGGACCTCACCAACAATAATATAGCAACCACTAGCATACCATCTTCTGTGAGTATATTAGAAGCCCAGAATGCTCCAATAAAAGGCATGCATATTGAAGCGAGATCAGGGGACCCGTCAGCTGTTGCTGGAGCATCCATATTAGCATCTTTATCTAATCGTCATAAAGATTTGTCCCTCCTTCCCCCTCCTTCTAATACTGGCAAGGATATCCAACAGAATAATGAGGTTCCTTCACTACATTCTGCCCATGGGGATGATACTCTTGACAATATGAAGGCTGTCACCAATAATGATCAGCCAGGTTCTGTTGTTTCGAATGAGAAAACTGTTCTTGCATCTTCAACCACAGCCAATGAAAATCCTAGCCTTGACATCAATGAGATAGATGCTACAATGGACGTGGATGTTGGAAAGGTGTCCAGGGCTTGTGAATTAAACTCATTTTTCCGGATGCTTGCTGGCTCAGGTGCTGAATATGATTTAGCTTTTAACATTTCCAAGATATTGGAAGATCGAAGGGAATTAAGAGAACTCCTTAAGGATCTTGATACCCCAACAATTTTGTTATCTGCCAGGCAGCAAGCCTTTAAGGACAGGTTACAGCAAGGAATGCTGCATCCTGATGATATTGGGGTCTCATTTGAAAGTTTCCCATATTTTTTAAGTGAGACAACAAAGAATGTTTTGATTGCTTCTGCATACATTCATTTGAAGGGTAATGGATTTGCAAAATATGCTTCTGACCTCCCTTCAGTGTGCCCACGGATATTATTATCTGGTCCAGCAGGTTCTGAAATATATCAGGAAACTTTGACTAAGGCACTTGCTAAGCATTTTGGTGCTAGGCTATTAACCGTGGATTCTCTGTCACTGCCTGGTgtAACATTCCTAAAGGATTCTGATTCTGCTAAAGAAATTCCAAGACCGGAAAGAACATCAGTGTTTGCAAAGCGAAGCTCACAAGCTGCCACGCTACAGAGTAAGAAACCAACTTCTAGCGTTGATGCTGATATTGTAGGCGGATCCACGTTAAGTTCACTGGCTGTGACAAAGCAGGAGGTATCTACTGCATCATCAAAAGGCACTGCTCTTAAAACAGGTGATCGGGTAAAGTTTGTTGGTAATTTGACTTCTGTCTCATCCATACAAAATTCTCCTTCAAGGGGACCAAGCATTGGCTCTCGAGGAAAAGTTCTTCTTGCATTTGAAGATAATGGTTTGTCAAAAATTGGAGTTCGGTTTGATAAATCAATTCCAGATGGGAATGATCTTGGAGGCCTTTGCGAAGATGATCGTGGATTCTTTTGTTCTGCTAGTCATTTGCAACGATTAGATGGTTCTGGAGGGGATGACCTTGACAAACTTGCAATTAATGAAATCTTTGAGGTTGCTTCAAATCAGTGTAAAAGTGGTGCACTAGTGTTGTTTATGAAAGACATAGAGAAGGCTATGGTGGGAAATTCTGATGTTTTGAGaaataaacttgaaaaattaCCACATAATGTTGTTGTGATTGGCTTACATACCCAGATGGACAATCGTAAAGAAAAGACCCACCCTGGTGGTCTTCTATTTACGAAGTTTGGGAGCAACCAGACAGCACTACTTGATTTTGCTTTTCCGGATAACTTAAGTAGCAGGCTGCATGATAGGAACAAAGAAACCCCCAAAGCAATGAAGCAACTTACTCGTCTCTTCCCTAACAAGGTTACGATACAACTGCCTCAGGAAGAGGCTTTGCTTTCTGATTGGAAGCAACAGCTAGAACGTGACATTGAAACTATGAAAGCTCAGTCAAATATTGTCAGCATTCGCTCGgCTCTCAATAGAATAGGAATAGAATGCCCTGACCTCGAGGCTCTATGCATTAAAGATCAAGCTCTATCTACTGAAAGCGTGGAAAAAATTATTGGCTGGGCAGTAAGTCACCATTTTATGGATTCGGCCGAAGATTCAATCAAAGACTCTAAACTTGTGATATCCGTGGAAAGCATTAAGTATGGGCTGAACATTCTACTGGGTATTCAAAGTGAAAACAAGAACTTAAAGAAATCCCTTAAGGATGTCATTACTGAGAATGAATTTGAGAAGAAACTGCTTGCTGATGTTATTCCCCCAAGTGATATCGGGGTGACATTTGATGATATTGGAGCTTTAGAAAATGTCAAGGATACCTTGAAGGAGTTAGTTATGCTTCCTCTTCAGAGGCCTGAGTTGTTTGGGAAAGGACAGTTAACTAAGCCTTGCAAGGGTATATTGCTTTTTGGACCGCCTGGTACTGGGAAAACAATGCTTGCAAAAGCTGTAGCAACTGAGGCCGGAGCAAATTTCATCAACATTTCTATGTCGAGCATTACTTCAAAATGGTTTGGTGAAGGGGAGAAGTATGTCAAGGCAGTCTTTTCCCTAGCCAGCAAAATTGCTCCTagtgttatttttgttgatgagGTTGACAGCATGTTAGGAAGACGTGAAAATCCTGGTGAGCATGAGGCTATGCGTAAAATGAAGAATGAGTTTATGGTGAATTGGGATGGTCTGCGTACAAAAGATAAAGAACGTATACTTGTTCTTGCTGCTACAAATAGGCCTTTTGATCTTGATGAGGCTGTGATTAGGAGGCTTCCACGGAGATTGATGGTTAATTTGCCAGATGCTCccaatagagaaaaaattatcagaGTCATTTTAGCGAAAGAAGATTTGGAACCTGATGTTGATTTGGAAGCAATAGCTAATATGACTGATGGATATTCTGGAAGTGACTTGAagAATCTGTGTGTCACAGCGGCTCACTGTCCaataagagagattttggATAAGGAGAAAAAGGAGAGAAATTTAGCATTAGCTGAGAACAGACCTTCACCTCCATTGCGTAGCAGTGCTGACATTCGTCCCTTAAAGATGGAGGACTTCAGATATGCACACGAGCAGGTGTGCGCAAGCGTGTCGGCGGAGTCAACAAATATGAATGAGCTACTGCAATGGAATGACCTTTATGGGGAAGGTGGATCAAGAAAGATGAGATCTTTGAGTTATTTCATGTA 3758 0.4156 MVETRRSSSSSKRSLSSPPPTNAKRSKVSEDASSTTLPSPEILDPVNESRNESRELEIPSSDLPDTDSLKAVDPFDAMLPEKSPAVPVEDKALVSPQSLGETAVDAEKPKVVRTAALRRSKKRSTKSKKSTSTVAWGKLLSQSSQNPHLSMYDSPFTVGQGNRCNLCIKDPDVSNILCKLKHIEHGGSSVALLEISGCKGVVQVNGKIHRKNSRVLLSGGDEVVFSSSGKNAYIFQDLTNNNIATTSIPSSVSILEAQNAPIKGMHIEARSGDPSAVAGASILASLSNRHKDLSLLPPPSNTGKDIQQNNEVPSLHSAHGDDTLDNMKAVTNNDQPGSVVSNEKTVLASSTTANENPSLDINEIDATMDVDVGKVSRACELNSFFRMLAGSGAEYDLAFNISKILEDRRELRELLKDLDTPTILLSARQQAFKDRLQQGMLHPDDIGVSFESFPYFLSETTKNVLIASAYIHLKGNGFAKYASDLPSVCPRILLSGPAGSEIYQETLTKALAKHFGARLLTVDSLSLPGVTFLKDSDSAKEIPRPERTSVFAKRSSQAATLQSKKPTSSVDADIVGGSTLSSLAVTKQEVSTASSKGTALKTGDRVKFVGNLTSVSSIQNSPSRGPSIGSRGKVLLAFEDNGLSKIGVRFDKSIPDGNDLGGLCEDDRGFFCSASHLQRLDGSGGDDLDKLAINEIFEVASNQCKSGALVLFMKDIEKAMVGNSDVLRNKLEKLPHNVVVIGLHTQMDNRKEKTHPGGLLFTKFGSNQTALLDFAFPDNLSSRLHDRNKETPKAMKQLTRLFPNKVTIQLPQEEALLSDWKQQLERDIETMKAQSNIVSIRSALNRIGIECPDLEALCIKDQALSTESVEKIIGWAVSHHFMDSAEDSIKDSKLVISVESIKYGLNILLGIQSENKNLKKSLKDVITENEFEKKLLADVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFGKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDKERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNREKIIRVILAKEDLEPDVDLEAIANMTDGYSGSDLKNLCVTAAHCPIREILDKEKKERNLALAENRPSPPLRSSADIRPLKMEDFRYAHEQVCASVSAESTNMNELLQWNDLYGEGGSRKMRSLSYFM 1252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g03006 1252 Pfam ATPase family associated with various cellular activities (AAA) 988 1117 IPR003959 GO:0005524|GO:0016887
Bva04g03006 1252 CDD AAA 986 1119 - -
Bva04g03006 1252 MobiDBLite consensus disorder prediction 1 42 - -
Bva04g03006 1252 Gene3D - 1120 1214 - -
Bva04g03006 1252 PANTHER P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN 1 1252 - -
Bva04g03006 1252 Gene3D - 946 1226 IPR027417 -
Bva04g03006 1252 SMART AAA_5 984 1121 IPR003593 -
Bva04g03006 1252 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 947 1226 IPR027417 -
Bva04g03006 1252 MobiDBLite consensus disorder prediction 1 73 - -
Bva04g03006 1252 ProSitePatterns AAA-protein family signature. 1091 1110 IPR003960 GO:0005524|GO:0016887
Bva04g03006 1252 MobiDBLite consensus disorder prediction 47 61 - -
Bva04g03006 1252 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 1 1252 - -
Bva04g03006 1252 Gene3D - 135 245 - -
Bva04g03006 1252 SUPERFAMILY SMAD/FHA domain 135 228 IPR008984 GO:0005515
Bva04g03006 1252 CDD FHA 153 235 IPR000253 GO:0005515
Bva04g03006 1252 Pfam AAA+ lid domain 1141 1177 IPR041569 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g03006 Bva-Chr4 25150496 25160727 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g03006 983 1188 Calmodulin-binding Proteins AT3G56690 36.667 2.20e-32 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g03006 - - gmx:100801477 1827.37