Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02992 ATGTCTTCAAAAGAAGCAGTAGTAGTTGTGGAGAACAATGAAGCGGAGATCGAGCAAGTTTGTGATCATCCTCGTGCTCATACTCAGTTGGCAAGATTTCAAAGAAATGACTCTCTGGACATGGAATCCCGCAGCTTTTCCACTCTTCGTGCTCATCCTTCACCTAAGGGACCGGCGATGTCAGTGATAATGCAACTAGCCTTCCAAAGTATCGGAATAGTGTACGGAGACATCGGAACGTCGCCGTTGTATGTGTACGCCAGCACCTTCACCGACGGCATCAAGCACAAGGATGACATACTAGGTGttctctctttgattttttacaCTATCACTCTCATCCCTCTTGTTAAGTACGTCCTCATCGTATTACGGGCCAATGACAACGGCGACGgGGGAACGTTTGCTTTGTACTCTCTGCTATGCCGCTACGCCAAAGTGGGACTGATCCCAAATCAGCAACTGGAAGATGCAGAGGTGTCTCATTACCAATTGGAATTGCCAAAAAGCAATCGTGTGAAGAGGGCTTCGAGGCTCAAGTCCAAGCTAGAGAATAGCCAGTTTGCCAAGCTCTTTTTATTGTTCGCTACCATGCTTGGAACTTCTATGGTCATTGGCGATGGCGTTCTCACTCCTTGCATTTCTGTTTTATCGGCTGTGGGAGGGATCAAACAAGAAACTTCAATAACAGATGATGGGGTCGTTTGGATATCCGTAGCCATCTTGGTGTGCTTGTTCATGGTTCAGAGATTTGGAACAGACAAAGTAGGCTACAGTTTTGCTCCAATCATCTGTATATGGTTCGCCTTCATCGGAGGCATAGGTGCTTACAATTTCATCAAGTATGATACCTCAGTCATCAAAGCAATAAATCCAAAATACATCATAGACTACTTCAGAAGGAACAAAAAAGATGCTTGGATTTCCCTTGGTGGTGTTGTGCTTGCAATAACAGGAACTGAGGCCCTCTTTGCTGATGTTGGTCATTTCACAGTAAGGTCCATTCAAATAAGCATGTGCTCTGTAACATACCCTGCTCTAATCTTGGCCTACACTGGACAAGCCTCCTTTCTTCGCGAAAACACTGATCTTGTTTCAGACACATTCTACAAGTCCTTACCACATAATTTATATTGGCCAATGTTTGTGGTTGCTGTTGCGGCTGCAATCATAGCTTCTCAAGCCATGATCTCTGGGACTTTCTCCATAATCCAACAATCCCTCTCACTGGGGTGTTTTCCCCGTGTGAAAATTGTACACACATCTGGCAAGTATGAAGGACAAGTTTACATCCCTGAAATTAATTACATCCTCATGTTAGCTTGTGTCGCCGTCACTGCTGGGTTTAAATCCACCACAAAAATTGGCAATGCCTATGGCATAGCAGTGGTGTTTGTGATGACCCTTACATCTGCTTTTCTCACTCTAATCATGATAATGATATGGAAGACGAACATTCTTTTGGTAATTGCCTATGTAGTAATCATTGGGTCTGTGGAGCTTATCTATTTGAGCTCAGTGCTATACAAATTTGACCAAGGAGGTTATCTACCCCTTGCCTTTGCTGCAGTACTAATGACCATCATGTATGTCTGGAACGATGTGTATCGAAGGAAGTACTATTATGAGTTGGAAAATAAGATTTCTCCAGAAAGGGTTAAGGAAATTGCTGTCAATGTGGAATTTTGTCGAATACCTGGCATGGCAATGTTCTATTCAGAGCTTGTTCAGGGCATCCCACCTATTTTCAAGCATTATATGGAAAATGTGCCAGCTTTGCACTCTGTTCTTGTCTTTGTGTCTATCAAGTCGTTACCCATCAGTAAAGTTCCCTTAGAAGAGCGGTTTCTTTTTCGCCGAGTGGAGCCAAAAGAACTTAATGTGTTCCGTTGTGTCGCAAGATATGGATACACTGATGTGCGCAATGAGCAAGAGCCTTTTGAGAAGGTGCTGGCCGAAAAGTTAAAGGAATTTATTGCTAACGAAATTTGGGTGTCCCAGAAATTGCTCCAAAATGCAGAAACTGCCGGTGGCGGTGGCGACGGCGACGGCGACGACATTGATGGTGTACAGCAAGCTTGTGATGAAGAGAGGACCCTAGAGGGTGTGGAAAGAGAAATTGAGGTAGTTGAGAAAGCAGAGCGAGATGGCATTGTGCACCTGATTGGTGAAAGCGAGGTGGTTGCTGGTAAAGGATCTGGAATAGGGAAGAGGATTTTGATAGACTACGGTTACaatttcttgaaaagaaaCTTGAGACAAACGGACAAAGTATTTGATATTCCTCACAAGCGTTTGGTCAAAGTGGGAATGACTTATGAGCTTTA 2327 0.4345 MSSKEAVVVVENNEAEIEQVCDHPRAHTQLARFQRNDSLDMESRSFSTLRAHPSPKGPAMSVIMQLAFQSIGIVYGDIGTSPLYVYASTFTDGIKHKDDILGVLSLIFYTITLIPLVKYVLIVLRANDNGDGGTFALYSLLCRYAKVGLIPNQQLEDAEVSHYQLELPKSNRVKRASRLKSKLENSQFAKLFLLFATMLGTSMVIGDGVLTPCISVLSAVGGIKQETSITDDGVVWISVAILVCLFMVQRFGTDKVGYSFAPIICIWFAFIGGIGAYNFIKYDTSVIKAINPKYIIDYFRRNKKDAWISLGGVVLAITGTEALFADVGHFTVRSIQISMCSVTYPALILAYTGQASFLRENTDLVSDTFYKSLPHNLYWPMFVVAVAAAIIASQAMISGTFSIIQQSLSLGCFPRVKIVHTSGKYEGQVYIPEINYILMLACVAVTAGFKSTTKIGNAYGIAVVFVMTLTSAFLTLIMIMIWKTNILLVIAYVVIIGSVELIYLSSVLYKFDQGGYLPLAFAAVLMTIMYVWNDVYRRKYYYELENKISPERVKEIAVNVEFCRIPGMAMFYSELVQGIPPIFKHYMENVPALHSVLVFVSIKSLPISKVPLEERFLFRRVEPKELNVFRCVARYGYTDVRNEQEPFEKVLAEKLKEFIANEIWVSQKLLQNAETAGGGGDGDGDDIDGVQQACDEERTLEGVEREIEVVEKAERDGIVHLIGESEVVAGKGSGIGKRILIDYGYNFLKRNLRQTDKVFDIPHKRLVKVGMTYEL 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02992 775 Pfam K+ potassium transporter 67 639 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva04g02992 775 TIGRFAM kup: potassium uptake protein 66 774 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva04g02992 775 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 27 774 IPR003855 GO:0015079|GO:0016020|GO:0071805
Bva04g02992 775 PANTHER POTASSIUM TRANSPORTER 27 774 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02992 Bva-Chr4 25104516 25108110 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02992 11 775 Inorganic Solute Cotransporters AT4G13420 53.885 0.0 855
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02992 K03549 - cit:102613864 1156.35