Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02991 ATGAGTACTGATAGCATAGGCAAAATCTCAAACAAAGAAGGTTTTAAGTACGATTTCACTGCAGGTGCAAGTACCGGTGGTTCTGGCTCTGCAGCTCAAGATGAAACCATTAAGCAGCAAGATCGGTTGCTTCCAATAGCTAATGTGGGGAGAATCATGAAGCAGATTCTTCCCCCCAACGCGAAGATCTCGAAGGAAGCCAAAGAAACTATGCAAGAATGTGTGTCTGAGTTCATAAGCTTCGTCACCGGAGAAGCTTCTGATAAGTGTCACAAGGAGAAGCGCAAGACGGTGAACGGCGATGATATTTGCTGGGCTTTGGCTGCTCTAGGGTTTGATGACTACACTGAGCCGCTGAAAAGGTATTTGCATAAATATAGGGAATCAGAAGGGGAGAGAGCTAACCAAAATAAAGCTAACAgtgatgaaaataatgaaacagCTGATAATGTTTATGGAGGTGAGCCACCAAGGAATACTGATAATGGCTCTCAGTCCTGGCAATTTTCCAAGTTTTA 518 0.4247 MSTDSIGKISNKEGFKYDFTAGASTGGSGSAAQDETIKQQDRLLPIANVGRIMKQILPPNAKISKEAKETMQECVSEFISFVTGEASDKCHKEKRKTVNGDDICWALAALGFDDYTEPLKRYLHKYRESEGERANQNKANSDENNETADNVYGGEPPRNTDNGSQSWQFSKF 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02991 172 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 27 150 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bva04g02991 172 MobiDBLite consensus disorder prediction 127 172 - -
Bva04g02991 172 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-5 27 150 - -
Bva04g02991 172 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Bva04g02991 172 PRINTS CCAAT-binding transcription factor subunit A signature 109 127 - -
Bva04g02991 172 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Bva04g02991 172 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 43 107 IPR003958 -
Bva04g02991 172 Gene3D Histone, subunit A 30 158 IPR009072 GO:0046982
Bva04g02991 172 SUPERFAMILY Histone-fold 40 153 IPR009072 GO:0046982
Bva04g02991 172 ProSitePatterns NF-YB/HAP3 subunit signature. 74 90 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bva04g02991 172 MobiDBLite consensus disorder prediction 157 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02991 Bva-Chr4 25102025 25102621 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02991 36 137 CCAAT-HAP3 Transcription Factor Family AT2G47810 81.373 9.34e-61 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bva04g02991 CBFD_NFYB_HMF 1.2e-27 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02991 K08065 - gmx:100817274 238.039