Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02988 ATGGAGGTCTTGAAGGACGACTTTTCGGAGCTAGAGATTGGAAATTCGGTGGAGTCTGTCCAGAAATTTTTGGTTTCTCAAAAGGAGCTATTCCATATGCAGATCGATCAGCTCCAGAGGATTGTAGTAAAGCAATGCGAACTCACCGGCGTCAATCCTCTCTCTCAAGAAATGGCGGCTGGTGCTTTGTCAATAAAAATTGGAAAAAGACCCAGGGATTTGCTAAATCCAAAGGCTGTAAATTATATGCAATCAGTTTTCTCCATTAAAGACGCAATTTCTAAGAAAGAATCTCGAGAAATCAGTGCTTTATTTGGCGTTACAGCTACAcagGTTCGTGAGTTTTTCACCAGTCAACGTTCGAGAGTGAGGAGACTACTTCGGTTTTCAAGGGAGAGGGCCTCAAGATCTAATTCCTATGAAGAATCTCATGATGGTTTTCTGACAAACTCTGATCCTATGAGACCAATCAATCCAACTCCCTTAAAATCTGTTGGCCCTGCCAGTGTTGAAGAAGTGTCTTCAACACAGGAGAATGCATTGCCCGATCTGGATGACTTGGACAAATACTTcgttgataatatttttagtttaatgcGGAAAGAGGAAACATTTTCTGGGCAGGAGAGATTGATGGAGTGGATATTGAAGATACAGAATTCTACAGTATTATGTTGGTTTTTAAGCAAAGGAGGTGTGATGATTTTAGCAGCTTGGTTGAGTGAAGCAGCTGTTGAAGAGCAAACAAGTGTTCTTCTTCTTATGTTGAAGGTTCTTTGTCATTTACCACTACATAAATCCCTTCCTGTACACATATCAGCTATATTGCAGAGTGTTAATAGACTGCGGTTCTATAGGACACCAGACATATCAAACAGGGCAAGAGTTTTGTTATCAAAATGGAGCAAATCATTAGCAAGGAACCAGGCGATGAAGAAACCCAATGGCGTTAAAGCTTCTATTGTTGCTCAAAATGAAAGACTGCTTACTCAGAGTATTGGTCAGATTATGGGCAATGAATCATGGCATTCAGATATTGATGTCCCCGAAGACATTCTTGCCCTCTCAAATGAGGCTTCTGATAATTCCAGGAAATTGGAAGCTCCACAAGCTGTGAAGCTGTTGTTAGCCCCTTCAGatgattcaaataaaaagcCAGTTCTTGGTGTATCTTCGTCATATAGGGAGCGCAGGAAAGTGCAGTTAGTGGAGCAGCCAGGTCAAAGAACAGTGAACAGGAGCCCACAGGCCACAAGATCAGCACCAAGCCAAGGCCGTCCCATGTCTGCTGATGATATCCAGAAAGCAAAAATGCGAGCTTTATTTATGCAGAGCAAGCATGGGAAAACTGGttcattaaaagaaaggaaatacgGAAAGATTGATGGTCTGCATAATAAACCTTTGACAGATCAGGCTAGTGTTGTGGCTTCCTCATCGAAAGTTCCTGTTTTACCCAAAATTGAGGAAGTAAACAAACCTTTTTTGCTTCCCTCTAAAACCTCTTGTAAGCAGGAAGTTTCCTTTGATCCAAAACTGAGAATGGATTTGAAGGAACCTCTCTGGGAGAAGTGCAAGAGGGTACCAATCCCATGGAACACACCAGCAGAAGTGAAACTTAACGATATCTGGAGGGTTGGTGCCGGTGAAAATAGCAAAGAGGTTGATGTCCAGAAAAACAGAAACCGCCGTGAGAAAGAAACTATTTATCAGAGTGTTCAAGAGATACCCTCGAACCCCAAGGAGCCATGGGACTTGGAGATAGACTATGATGACACTCTGACCCCAGAAATCCCCAGTGAGCAATTGCCAGATGGTGATAGTGCAGAAACAACAGTTGCCAGTGATCAAGGTGCAACAGTATCAGCCACCTCATCGTCAAATGGTAATGCAGTTGCTGCTGAACCTGATTTAGAGCTGCTTGCCGTACTGCTCCAAAATCCACGCTTGGTATATGCCTTGACTTCTGGACAAACTGGTAATTTACCAAATGAGGAGACTTTAAAACTGCTTGACATGATTAAGAAAGGTGACGTGAAGTTGCCTGGAGATGTAAATGACATATCTGTAAATGCCCATCAGAATGTGGAGTTTTCTCTACCGTCTCCAACTCCTTCTACCGATCCAAGAACGAGTGGATATAGCACAGAAGCTGCAAAGAACCTTTTCTCACGTCAGAGTGACAGAATTCCCCACAGTTCTCCGGTAACAGCCACCACAAATTTGGTACTTTCTCAGAATCCAGTTGCGGGCATTGCTTTACCTCAGCAGCCGACAAATGTGCTCCCATCTCCCCAGCAGCTCGCAGCAGCAAAATCTCCATATACCATTGTTCCTGAAAGGCAACCGCCATCTGCTCTTTCCTCCGTGCATCGTAGTCACCTCACCAATTCTCCAACAATACAAACACCAGCCTCAGATATAGGTTTAACCATGAAGAACATGATCACCACAAATGCATCTGCAGTTAACATATCCAGCGCTCATTCATCTTTAGCTTTGCGGGTCGACGGCACGAGTAATCTAAAACCAGTACATAATTTGAGTATACAAGAGAGATTGTTTGACTCTAATGCAATCCCGCAATCCTTTGTGATGCCATCACTAACACCATCACCATCACTTTCAGCCCCACAGCCACAAAGACATCACCATTTATTGCAGCAGTCCCATTTGTCTGAAGCTACCTATCATGCTCCCCCACACTCTTATCCACAACAAATTGAAAAACCAAACAACCTTCCTGCGTCAGATATGTGGAGAGCTAGGCAGGATGTGTCTTCCAATTATCATTCTCAACTAAATCAAAACAACACTGACGCAATGCTTGGAGTTTCTATGCAATCTGGTTCTTCTTGGGAAAGGAATGATCATGGGGTGAGAGGATTTGAATCATGGAGTCCAGAGAATAGTCCAACTATAAATCATGGTTATATTCCAGGAAGAAACTTACCTGAATCCAGAATGAATCCCGGGAGAAATTATAGGCCTGAATGGTCAAGGGAACGGGGGTCTTCTGGGTATTTTAATCCTAGTAGACAGGGAAACAGAAAGTGGAATGATAGGAGACAATG 3074 0.4245 MEVLKDDFSELEIGNSVESVQKFLVSQKELFHMQIDQLQRIVVKQCELTGVNPLSQEMAAGALSIKIGKRPRDLLNPKAVNYMQSVFSIKDAISKKESREISALFGVTATQVREFFTSQRSRVRRLLRFSRERASRSNSYEESHDGFLTNSDPMRPINPTPLKSVGPASVEEVSSTQENALPDLDDLDKYFVDNIFSLMRKEETFSGQERLMEWILKIQNSTVLCWFLSKGGVMILAAWLSEAAVEEQTSVLLLMLKVLCHLPLHKSLPVHISAILQSVNRLRFYRTPDISNRARVLLSKWSKSLARNQAMKKPNGVKASIVAQNERLLTQSIGQIMGNESWHSDIDVPEDILALSNEASDNSRKLEAPQAVKLLLAPSDDSNKKPVLGVSSSYRERRKVQLVEQPGQRTVNRSPQATRSAPSQGRPMSADDIQKAKMRALFMQSKHGKTGSLKERKYGKIDGLHNKPLTDQASVVASSSKVPVLPKIEEVNKPFLLPSKTSCKQEVSFDPKLRMDLKEPLWEKCKRVPIPWNTPAEVKLNDIWRVGAGENSKEVDVQKNRNRREKETIYQSVQEIPSNPKEPWDLEIDYDDTLTPEIPSEQLPDGDSAETTVASDQGATVSATSSSNGNAVAAEPDLELLAVLLQNPRLVYALTSGQTGNLPNEETLKLLDMIKKGDVKLPGDVNDISVNAHQNVEFSLPSPTPSTDPRTSGYSTEAAKNLFSRQSDRIPHSSPVTATTNLVLSQNPVAGIALPQQPTNVLPSPQQLAAAKSPYTIVPERQPPSALSSVHRSHLTNSPTIQTPASDIGLTMKNMITTNASAVNISSAHSSLALRVDGTSNLKPVHNLSIQERLFDSNAIPQSFVMPSLTPSPSLSAPQPQRHHHLLQQSHLSEATYHAPPHSYPQQIEKPNNLPASDMWRARQDVSSNYHSQLNQNNTDAMLGVSMQSGSSWERNDHGVRGFESWSPENSPTINHGYIPGRNLPESRMNPGRNYRPEWSRERGSSGYFNPSRQGNRKWNDRRQ 1024
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02988 1024 ProSiteProfiles 'Homeobox' domain profile. 66 126 IPR001356 GO:0003677
Bva04g02988 1024 MobiDBLite consensus disorder prediction 963 1024 - -
Bva04g02988 1024 SMART HOX_1 68 130 IPR001356 GO:0003677
Bva04g02988 1024 SUPERFAMILY Homeodomain-like 69 131 IPR009057 -
Bva04g02988 1024 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 1023 - -
Bva04g02988 1024 MobiDBLite consensus disorder prediction 782 802 - -
Bva04g02988 1024 MobiDBLite consensus disorder prediction 385 431 - -
Bva04g02988 1024 PANTHER HOMEOBOX PROTEIN LUMINIDEPENDENS 1 1023 - -
Bva04g02988 1024 MobiDBLite consensus disorder prediction 600 630 - -
Bva04g02988 1024 Gene3D - 68 125 - -
Bva04g02988 1024 CDD homeodomain 69 125 IPR001356 GO:0003677
Bva04g02988 1024 MobiDBLite consensus disorder prediction 605 630 - -
Bva04g02988 1024 MobiDBLite consensus disorder prediction 405 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02988 Bva-Chr4 25081137 25088922 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02988 1 726 Homeobox Transcription Factor Family AT4G02560 51.201 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02988 - - gmx:100806633 1212.59