Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02984 ATGGTAGAGAGGAGGAAGCCTTTGGTACTCTCTTCCACCAGACTTGTCATCAATTCCGTCCTGAGCTCTTGTCGAGCTGAACAAGAAGCTGACCGTGGAGGAGACGAAGGCAAGCTCTTAGGTACTGATTCTTACACGACGACGGAGACCTTGCAGTTATCTGTAGGGATTCTCCTATTCTTAAAGGATGCAAATGACAAAACGGACCCCCAATTGGCTTCCCTTGACGATTCTGCATTGGTTGGCCTCTGTAGTTCTCTTCTGAAAACGCTTTCTATTACTTCTGGCTCATTGGTCATCGTCAAGAATGTTGAGATGAACATACAGAGGATTGCCCAGGCCATTGCTCTAGATCCCCCAGGCACCCATGAGCACGCATCTCAAATTGAACTGCCCTCTTCTCAGTCTTCTCGTATAAtgctttcatttccttcttgttCTTTCCCTCATAGCAACTTCTTGTTGTTAGACCATAAAGTTGCTTTTTTATCTCCTCTTTTAGCTTTTAATCTTAACTTACACATGACATGCTTAAAATCCATTATGCACCAAGGGCAAGAGGTGTTAGCATCTTATTTTGATCCTGAAGTGAATGATGAGGTTACTACCAAAAACGTTAAGGCTTCTGTCATTAATATAGAACTTGTACCTTCTGTTCAAGTTCTTAAATATGCATCACATTTGAGGGTTGCATTCGTGAAGATACCAGAGTGTGGTGTCCTTGAATCTATTAGAGGAAGTTCACATATCGAATCTGAAGAATATCAGGACATGATTGATTTGGCATTACAAAGATACTTTGAAGTAGATAGATATTTGTCAAGAGGAGATATTTTCTGCATCAACATTAGTTGGAAATGCAATTCCGTTATTTGTATTCCCTGCAACCAAATatcaccaaagaaaaaagataaccTCATCTACTTCAAGGTCATTGCTATGGAACCATCAGAGGAACCAGTTCTTTGTATCAATCGAACTTCAACTGCTCTGGTGCTGGGAGGAAGTTCCCCTTCTGCTCTTCCTCcgaattttttaattgctgGACCTGAAGAAATTGTGCCTTTACAAGGGGACGCTGTGAAGATTTTGGCTTCAATCCTTACCCCACCTTTCTGTCCATCAGCACTGTCTTCAAAGTTCAGAGTTTCAGTTCTCTTGTTTGGTTTGGCAGGTTGTGGGAAGAGGACTGTTGTTAGATATGTTGCTCATCGACTGGGCCTGCATGTGGTGGAATATAACTGCCATGATCTGATGTTGTCTGAAAGAGATACAGCTGTTGCCCTAGCTCAAGCTTTCAGGACAGCTCAAAGATACTCACCAGCAATACTTCTTCTACGTCATTTTGATGTTTTCCGAGATTCTCATCCATTTGATGGTTCGCCAAATGATCAAAGAGGCAATACATCAGAAGTTGCATCTGTTATTAGGAAATTCACTGAGCCAATtattgaagatgatgatgtttACTCCCAGGATAAACCAAATATTCACTTTGATGAGAAGAATGCTGAAAAGGCAAATGGGCATCAGGTCCTATTGATTGCTGCTGCTGACAGTTCAGAAGGTCTGCCTTCAACAATCAGACGCTGCTTTAGCCATGAAGTAAATATGGGACCTTTGACTGAAGAACAAAGGGCTGAAATGCTATCCCAGTCACTGCAAAGTGTTCCTGGACTTTTTTCTGAAACTGATCCAGAGAGTTTTGTTAAGGAAGTAGTTGGACAGACATCCGGTTTCATGCCTAGGGACATGTGTGCCTTAATTGCTGATGCTGGTGCCAATTTATTTCCCAGGAGCACTGCTGCAGTAGACAATGATAAGCCTGAGGATATAGATGGTTCCCTTAATTCCAAAGTTATTCCAGACAGCAAGCACGGAAAAGATTCACCTCAGGTTCCACAGAAAGAAGACTTGATGAAAGCTTTAGAGcgatcaaagaaaagaaatgcatCAGCTTTGGGTACTCCAAAGGTTCCAAATGTGAAATGGGAAGATGTTGGTGGGCTTGAAGATGTGAAAAAGTCAATCCTGGATACTGTTCAGttgCCTCTACTGCATAAGGATTTGTTTGCATCTGGACTACGTAAGCGGTCTGGTGTTCTTCTATATGGCCCCCCTGGAACTGGCAAGACATTGTTAGCAAAAGCTGTTGCCACAGAATGctccttaaattttttgagtgTAAAAGGGCCTGAATTGATCAACATGTACATAGGAGAGTCTGAGAAGAATGTCAGAGACATTTTCCAGAAGGCCAGGTCAGCACGTCCATGTGTTATCTTCTTTGATGAGCTTGATTCTCTCGCTCCAGCTCGAGGTGCTTCTGGGGATTCTGGGGGTGTTATGGACAGAGTGGTTTCTCAGATGCTTGCAGAGATCGATGGCTTAAATGATTCTACACAGGATCTCTTCATCATAGGTGCAAGTAACAGACCAGATTTGATAGACCCGGCACTTTTACGCCCTGGCCGATTTGATAAACTTCTATATGTTGGAGTTAACTCTGATGCATCTTACAGGGAGCGAGTCCTGAAAGCTCTCACCAGAAAGTTTAAATTGCATCAAGATGTTTCACTTTACTCGATAGCAAAAAAATGTCCACCAAACTTCACCGGTGCAGACATGTATGCCTTGTGTGCAGATGCTTGGTTTCAAGCTGCAAAGCGCAAGGTTTTGAGTGCCGATCCAGAGCCGTCCTGTAAAGATGACTTACAGGAAGCAGATTCAGTTGTTGTTGAATACAGTGATTTTGTACAGGTCTTGGTAGAGCTGACGCCTTCCCTCTCCATGGCTGAGATTAAAAAGTACGAGCAACTCAGAGATCAGTTTGAAGgcacatcaaaatcaaaatg 2855 0.4102 MVERRKPLVLSSTRLVINSVLSSCRAEQEADRGGDEGKLLGTDSYTTTETLQLSVGILLFLKDANDKTDPQLASLDDSALVGLCSSLLKTLSITSGSLVIVKNVEMNIQRIAQAIALDPPGTHEHASQIELPSSQSSRIMLSFPSCSFPHSNFLLLDHKVAFLSPLLAFNLNLHMTCLKSIMHQGQEVLASYFDPEVNDEVTTKNVKASVINIELVPSVQVLKYASHLRVAFVKIPECGVLESIRGSSHIESEEYQDMIDLALQRYFEVDRYLSRGDIFCINISWKCNSVICIPCNQISPKKKDNLIYFKVIAMEPSEEPVLCINRTSTALVLGGSSPSALPPNFLIAGPEEIVPLQGDAVKILASILTPPFCPSALSSKFRVSVLLFGLAGCGKRTVVRYVAHRLGLHVVEYNCHDLMLSERDTAVALAQAFRTAQRYSPAILLLRHFDVFRDSHPFDGSPNDQRGNTSEVASVIRKFTEPIIEDDDVYSQDKPNIHFDEKNAEKANGHQVLLIAAADSSEGLPSTIRRCFSHEVNMGPLTEEQRAEMLSQSLQSVPGLFSETDPESFVKEVVGQTSGFMPRDMCALIADAGANLFPRSTAAVDNDKPEDIDGSLNSKVIPDSKHGKDSPQVPQKEDLMKALERSKKRNASALGTPKVPNVKWEDVGGLEDVKKSILDTVQLPLLHKDLFASGLRKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFQKARSARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLNDSTQDLFIIGASNRPDLIDPALLRPGRFDKLLYVGVNSDASYRERVLKALTRKFKLHQDVSLYSIAKKCPPNFTGADMYALCADAWFQAAKRKVLSADPEPSCKDDLQEADSVVVEYSDFVQVLVELTPSLSMAEIKKYEQLRDQFEGTSKSK 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02984 951 Pfam ATPase family associated with various cellular activities (AAA) 385 537 IPR003959 GO:0005524|GO:0016887
Bva04g02984 951 Pfam ATPase family associated with various cellular activities (AAA) 701 833 IPR003959 GO:0005524|GO:0016887
Bva04g02984 951 CDD AAA 685 833 - -
Bva04g02984 951 MobiDBLite consensus disorder prediction 601 635 - -
Bva04g02984 951 Gene3D - 835 923 - -
Bva04g02984 951 Gene3D - 659 938 IPR027417 -
Bva04g02984 951 SMART AAA_5 697 837 IPR003593 -
Bva04g02984 951 SMART AAA_5 381 542 IPR003593 -
Bva04g02984 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 660 943 IPR027417 -
Bva04g02984 951 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 356 599 IPR027417 -
Bva04g02984 951 PANTHER AAA-FAMILY ATPASE 47 945 - -
Bva04g02984 951 CDD AAA 375 446 - -
Bva04g02984 951 PANTHER PEROXISOME ASSEMBLY FACTOR 2 47 945 - -
Bva04g02984 951 Gene3D - 352 559 IPR027417 -
Bva04g02984 951 ProSitePatterns AAA-protein family signature. 804 822 IPR003960 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02984 Bva-Chr4 25051970 25058731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02984 667 892 Calmodulin-binding Proteins AT3G56690 38.767 1.01e-39 157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g01872 13 15332182 15333165 Bva04g02984 04 25051970 25058731 BWGD