Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02983 ATGAAAGCTGCTCGGAGTCTCTGGTTGGGTTATCGAGCTACTTCTTGTTTATTTCCTTCCATAAAACATTCTATTGGATATTCAAAtgcacaaatttttatttattttcagaatcGATCACTTCACAGATCAATCCCTCTCAAATTCTCCGCAAATGAATCCAACTTCACTGTCTCTTATCTCATACACTCTTGCGGGTTGGCTCCAGCAACTGCAGTTTTAACTTCCCAAAAGGTACAGCTTCATTCACCAGAAAGACCTGATTCTGTCATAACTCTGCTGAGAAATTATGGGTTCTCAAAATCCCAGATTTCGATTATTGTTAGGAAGCGCCCACCACTCCTGTTAGCTAGTTCAGAGGATACCCTTTTGCccaaacttcaattttttcggTCTATTGGCCTTTCTGAGTCTGACCTTCCTAGGATCCTCACTAGAGACCCAACTCTTATGGCAAGAAGCTTAGAGAAATATCTAATACcttcttataattttcttaaaggtGTGTTGCTTTCAGATGAAAAGGTTGTTGCTGCCCTAAAGCGCACGACTTGGATTTTTCTTGAAGACCATTCTAAGAATCTTATACCAAATCTTGCTGTTTTGCGAGAAGTGGGTGCGCCAGAATCACGCATTGCGTTTTTGCTAACTCATTTTCCGGAAGCATTGAtacaaaagaatgaagaatttataaagattGTTGGAGAGGTTAAGGAAATGGGATTTAATCCGAAGAAGACTACATTCGTTCTAGCGATTCACGCTATGTCAGGGGGAGCGAACAAGTCAATATGGAAGCGATGTTACGAGGTTTATCAGAGGTGGGGTTGGTCCAAGGAAGACATTCTATTGGCATTTACGAAGCATCCAAATTGTATGATACTATCGGAGGATAAAATAATGAAGGCAATGGATTTCTTTGTGAACAAGATGGGTTGGCCTTCAGGGAAGATTGCCAGACGCCCTACGGTTTTATTTCTCAGCTTGGAGAACAGAATCAAACCAAGGTGTTTAGTTGTTCAAGTTTTATTGCAGAAGGGATTGATTAAGAGGCCTTTGAGCTTGGTTACTTTCCTCTGTCCTGGCGAGAATCATTTTCTGGAGAAATTTGTAACCAAATATGAGCAGGAAGTGCCTCAGTTGCTGAGTATGTATCAGAAGAAGGTGGATATTGAGAGTCTGACTTG 1187 0.3858 MKAARSLWLGYRATSCLFPSIKHSIGYSNAQIFIYFQNRSLHRSIPLKFSANESNFTVSYLIHSCGLAPATAVLTSQKVQLHSPERPDSVITLLRNYGFSKSQISIIVRKRPPLLLASSEDTLLPKLQFFRSIGLSESDLPRILTRDPTLMARSLEKYLIPSYNFLKGVLLSDEKVVAALKRTTWIFLEDHSKNLIPNLAVLREVGAPESRIAFLLTHFPEALIQKNEEFIKIVGEVKEMGFNPKKTTFVLAIHAMSGGANKSIWKRCYEVYQRWGWSKEDILLAFTKHPNCMILSEDKIMKAMDFFVNKMGWPSGKIARRPTVLFLSLENRIKPRCLVVQVLLQKGLIKRPLSLVTFLCPGENHFLEKFVTKYEQEVPQLLSMYQKKVDIESLT 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02983 395 Pfam mTERF 220 366 IPR003690 GO:0003690|GO:0006355
Bva04g02983 395 Pfam mTERF 92 245 IPR003690 GO:0003690|GO:0006355
Bva04g02983 395 PANTHER CGI-12 PROTEIN-RELATED 35 389 IPR003690 GO:0003690|GO:0006355
Bva04g02983 395 Gene3D Transcription termination factor 3, mitochondrial 151 382 IPR038538 -
Bva04g02983 395 SMART mt_12 213 243 IPR003690 GO:0003690|GO:0006355
Bva04g02983 395 SMART mt_12 105 136 IPR003690 GO:0003690|GO:0006355
Bva04g02983 395 SMART mt_12 177 208 IPR003690 GO:0003690|GO:0006355
Bva04g02983 395 SMART mt_12 315 349 IPR003690 GO:0003690|GO:0006355
Bva04g02983 395 SMART mt_12 141 172 IPR003690 GO:0003690|GO:0006355
Bva04g02983 395 SMART mt_12 283 314 IPR003690 GO:0003690|GO:0006355
Bva04g02983 395 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 35 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02983 Bva-Chr4 25049588 25050775 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva04g02983 mTERF 3.7e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02983 K15032 - qsu:112019279 492.656