Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02982 ATGGAAGTGGAAATCTTTCCCATCACTCGTGTATCATCAGCAATGAAAGCAGCTCAGAGTCTCTGGTTGGCTGCTTATCGAGCTACTTGTTTATTTCCTTCCAGAAAGTATTCTGTTACCAAACATTTTATTGGACATTCAAatgcacaattttttatttattttcagaatcGATCACTTCACAGATCAATCCCTCTCAAAATCTCCGCAAATGAATCCAACTTCACTGTCTCTTACCTCATAAACTCTTGCGGGTTGGCTCCAGCAACTGCAGTTTTAACTTCCCAAAAAGTACAGCTTCGTTCACCAGAGAGAGCCGATTCTGTCATAACTCTACTGATAAATCATGGGTTTTCAAAATCCCAGATTTCGATTATTGTCAGGAAGCGCCCACTACTCCTGTTAGCTAGTCCAAAGGATACCCTTTTaccaaaacttaaatttttccGGTCTATTGGCGTTTCCGAGTCTGACCTTGCTAGAATCATCACTCGGGACCCAACTCTTTTGGCAAGAAGCTTAAAGAAACACATAATACcttcttataattttcttaaaggtGTGTTGCTTTCAGATGAAAAGGTTGTTGCTGCCTTAAAGCGCACGTCTTGGATTTTTCTTGCAGACTATTCTAAGAATCTTATACCAAATCTTGCTGTTTTGCGAGAAGTGGGTGCGCCAGAATCACGCATTGCGTTTTTGCTAACTCATTTTCCGGAAGCATTGAtacaaaagaatgaagaatttataaagattGTTGGAGAGATTAAGGAAATGGGATTTAATCCGAAGAAGACTACATTCGTTCTAGCGATTCACGCTATGTCAGGGGGAGCGAACAAGTCAATATGGAAGCGATGTTACGAGGTTTATCAGAGGTGGGGTTGGTCCAAGGAAGACATTCTATTGGCATTTACGAAGCATCCAAATTGTATGATACTATCGGAGGATAAAATAATGAAGGCAATGGATTTCTTTGTGAATAAGATGGGTTGGCCTTCAGGAAAGATTGCCAGATGCCCTGCGGTTTTATTTCTCAGCTTGGAGAACAGAATCAAACCAAGGTGTTTAGTTGTTCAAGTTTTATTGCGGAAGGGATTGATTAAGCCTTTGAGCTTGGTTACTTTCCTCTGTCCTGATGAGAATCATTTTCTGGAGAAATTTGTAGCCAAATATGAGCAGGAAGTACCTCAGTTGTTGAGTGTGTATCAGAAGAAGGTGGATATTGAGAGTCTGATTTA 1241 0.382 MEVEIFPITRVSSAMKAAQSLWLAAYRATCLFPSRKYSVTKHFIGHSNAQFFIYFQNRSLHRSIPLKISANESNFTVSYLINSCGLAPATAVLTSQKVQLRSPERADSVITLLINHGFSKSQISIIVRKRPLLLLASPKDTLLPKLKFFRSIGVSESDLARIITRDPTLLARSLKKHIIPSYNFLKGVLLSDEKVVAALKRTSWIFLADYSKNLIPNLAVLREVGAPESRIAFLLTHFPEALIQKNEEFIKIVGEIKEMGFNPKKTTFVLAIHAMSGGANKSIWKRCYEVYQRWGWSKEDILLAFTKHPNCMILSEDKIMKAMDFFVNKMGWPSGKIARCPAVLFLSLENRIKPRCLVVQVLLRKGLIKPLSLVTFLCPDENHFLEKFVAKYEQEVPQLLSVYQKKVDIESLI 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02982 413 Pfam mTERF 111 264 IPR003690 GO:0003690|GO:0006355
Bva04g02982 413 Pfam mTERF 234 384 IPR003690 GO:0003690|GO:0006355
Bva04g02982 413 Gene3D Transcription termination factor 3, mitochondrial 170 399 IPR038538 -
Bva04g02982 413 SMART mt_12 232 262 IPR003690 GO:0003690|GO:0006355
Bva04g02982 413 SMART mt_12 160 191 IPR003690 GO:0003690|GO:0006355
Bva04g02982 413 SMART mt_12 196 227 IPR003690 GO:0003690|GO:0006355
Bva04g02982 413 SMART mt_12 334 368 IPR003690 GO:0003690|GO:0006355
Bva04g02982 413 SMART mt_12 302 333 IPR003690 GO:0003690|GO:0006355
Bva04g02982 413 SMART mt_12 124 155 IPR003690 GO:0003690|GO:0006355
Bva04g02982 413 PANTHER MITOCHONDRIAL TRANSCRIPTION TERMINATION FACTOR FAMILY PROTEIN 52 407 - -
Bva04g02982 413 PANTHER CGI-12 PROTEIN-RELATED 52 407 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02982 Bva-Chr4 25046834 25048033 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Bva04g02982 mTERF 1.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02982 K15032 - qsu:112019279 508.834