Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02966 ATGGCTTTCAATATGAGCCATATTCATGTGAAACTGGGGGTCCTTTCGTCCCATGATGATACTTCTGTAAATTCCATCACTCTATTTGTGCTTCTTCTTTGTGCTTGTGTTTTGATTGGGCATCTTCTGGAGAAAAGCAGATGGATGACTGAGTCCGTTGTTGCCCTCATTATTGGCTTTTTTACTGGAATTATCATTCTACTGACGACCGCGGGACAAAGTTCACATATCTTACTATTTAATGAAgaacttttctttatatatcttCTTCCACCCATCATATTTAATGCCGGGTTCCAGGTGAAAATGAAGCAATTTTTCCGGAATTTCGTGGCAATATTTCTGTATGGTGTTGTTGGGAGTATAATATCGTTTCTCATTGTATCACTGGGTTCAATACAGTTCTTCCAAAAATTGGACATTGGTTTGCTGGACTTGGGAGACTACTTTGCACTTGGAGCAGTATTTTCTGCTACAGATTCTGTCTGCACATTGCAGGTGCTTAATCAGGAAGAAACACCTCTTCTATATAGTCTGGTCTTCGGTGAAGGCGTGGTCAATGATGCTACATCTGTGGTTCTTTTTAACGCAATCCAGAAATTTGACCTATCTCACATAACCTCAGCCAATGTCATGCAGTTTCTTGgcaatttcttatatttattcgTGACAAGCACTTTTCTTGGAGTGGCGGTTGGCCTTCTCAGTGCCTACATTATAAAGAAGTTGTATTTTGGCAGGCATTCAACTGACCGAGAAATTGCTCTTATGATCCTGATGGCTTACTTTTCTTATATGGTTGCTGAACTGCTCGATTTAAGTGGGATCCTTACTGTGTTCTTTTGTGGGGTTGTCATGTCGCATTACACGTGGCATAATGTCACCGAAAATTCTAGAATCACAAGCAGGCATGCTTTTGCAACTTTCTCATTTATGGCTGAGATATTTATCTTCTTATATGTTGGCATGGATGCCTTGGACATTGAGAAGTGGAAATTCGCAAGTAACAGtCCTTGGACATTTGTTGCTGCAAGTGCTATATTGCTTGGCTTGGTTCTTCTTGGAAGGGCAGCTTTTGTGTTTCCCCTGTCATTTGTAGCCAACTTAACTAGGAAGTCTGAGACCGACAAGATTGGATTTAAGCAAcagATTGTAATATGGTGGGCTGGTCTCATGCGCGGTGCTGTATCTGTCGCACTTGCATATAATAAGTTTACTAGATCGGGGCATACTCAACTACAAGGCAATGCAATCATGATCACCAGCACCATCACAGTTGTTCTCTTGACTAATGTGGTGGGTGGATTATTGACAAAGCCTCTGATAAGGTCCTTGCTAAATCCCCATAGGCATTCAATGCATTCTGAGTTATCATCGGATAAGCATCTGTCTCTGCCACTTCTGTTGAATGGACAAGACTCAGAAGTTAACGTGGATACAGGCAACCCCCTTGATACAAATCACACTATCCATTACTTTTGGCGCCTGTTTGATGATAAATTCATGCGTCCAGTGTTTGGCGGCAGGGGATTTGTCCCTTCTTCTCCCACAGACAGCTCTCCGCATTA 1568 0.4101 MAFNMSHIHVKLGVLSSHDDTSVNSITLFVLLLCACVLIGHLLEKSRWMTESVVALIIGFFTGIIILLTTAGQSSHILLFNEELFFIYLLPPIIFNAGFQVKMKQFFRNFVAIFLYGVVGSIISFLIVSLGSIQFFQKLDIGLLDLGDYFALGAVFSATDSVCTLQVLNQEETPLLYSLVFGEGVVNDATSVVLFNAIQKFDLSHITSANVMQFLGNFLYLFVTSTFLGVAVGLLSAYIIKKLYFGRHSTDREIALMILMAYFSYMVAELLDLSGILTVFFCGVVMSHYTWHNVTENSRITSRHAFATFSFMAEIFIFLYVGMDALDIEKWKFASNSPWTFVAASAILLGLVLLGRAAFVFPLSFVANLTRKSETDKIGFKQQIVIWWAGLMRGAVSVALAYNKFTRSGHTQLQGNAIMITSTITVVLLTNVVGGLLTKPLIRSLLNPHRHSMHSELSSDKHLSLPLLLNGQDSEVNVDTGNPLDTNHTIHYFWRLFDDKFMRPVFGGRGFVPSSPTDSSPH 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02966 522 PANTHER SODIUM/HYDROGEN EXCHANGER 9 517 - -
Bva04g02966 522 PRINTS Na+/H+ exchanger signature 84 95 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva04g02966 522 PRINTS Na+/H+ exchanger signature 113 121 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva04g02966 522 PRINTS Na+/H+ exchanger signature 98 112 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva04g02966 522 PRINTS Na+/H+ exchanger signature 153 163 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Bva04g02966 522 Gene3D - 22 448 IPR038770 -
Bva04g02966 522 Pfam Sodium/hydrogen exchanger family 30 442 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bva04g02966 522 PANTHER SODIUM/HYDROGEN EXCHANGER 9 517 IPR018422 GO:0006812|GO:0015299|GO:0016021
Bva04g02966 522 TIGRFAM b_cpa1: sodium/hydrogen exchanger 3 25 463 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02966 Bva-Chr4 24959303 24964691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02966 11 522 Antiporters AT3G05030 67.542 0.0 730
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02966 - K14724 qsu:112020558 736.487