Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02954 ATGAAGACCAAGCTGATCTTATTAGCCTGTGTAGCAGTTTTAGGCTTTCTTGGGGTTTGCCAGGGTCTGCTCACCAAAAATTTCTACAAGAATTCGTGTCCTTCTGCCGAGTCCACTGTTAATCAGATTATCTCACAGCGTGTGTTGACAAATCCCAGTTTGCCTGCAAGGTTACTTCGAATGCATTTTCATGACTGCTTCGTCAGGGGTTGTGATGGCTCCATTTTGCTGAACTCAACTGCTAATAGTATTGCAGAGAAGGACGCACTCATCAATCTAAATTTGGCTAGCTTTGATGTTATTGATGAAATCAAAGCAGCACTCGAGACAGCATGTCCGAGAACTGTATCCTGCTCCGACATACTTGCATTAGCTGCTAGGGACGCTGTTTCCTTCCAATATAATAGAAACTTGTGGGTAGTGCTTACTGGTAGAAGAGATGGCACAGTATCATTAGCCTCAGAACCCCCGCTCAATCTCCCAACGCCTGACATGAACTTCACCCGACTTAAACAAAACTTTGCAAACAAGGGCCTCTCGCAGCAAGATCTAATTGTATTATCAGgTGGGCACACAATTGGAATAGGACACTGCTTCTTATTTAGGAGCAGGCTCTATAACTTCACCGGAAATGGGGACCAAGACCCTTCTTTGGATCCCACTTATGCTACGTTCTTGAAGACGCAATGCCCAAACGACAACACCGACTTCGTTTCGTCCGTGGAGATGGATCCTGCGAGCTCAACAAATGTTGACACCAACTACTATTCCAACCTTCTTCAGAAAAAGGGTCTGTTCTCATCAGACGCTGCTCTTCTAACCAACAATGATGCAAGAAATGCTGTGATACAATTGGTTAAAATAGATCGTTTCTTGAACGCGTTTGCTAATTCAATGGAGAGGATGGGAGCGATTGGGGTCCTCACGGGCACTGCCGGACAAATCAGGGAAAAATGCTGGCTTGTCAACTCCTCCACTTA 980 0.451 MKTKLILLACVAVLGFLGVCQGLLTKNFYKNSCPSAESTVNQIISQRVLTNPSLPARLLRMHFHDCFVRGCDGSILLNSTANSIAEKDALINLNLASFDVIDEIKAALETACPRTVSCSDILALAARDAVSFQYNRNLWVVLTGRRDGTVSLASEPPLNLPTPDMNFTRLKQNFANKGLSQQDLIVLSGGHTIGIGHCFLFRSRLYNFTGNGDQDPSLDPTYATFLKTQCPNDNTDFVSSVEMDPASSTNVDTNYYSNLLQKKGLFSSDAALLTNNDARNAVIQLVKIDRFLNAFANSMERMGAIGVLTGTAGQIREKCWLVNSST 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02954 326 Gene3D Peroxidase, domain 2 161 302 - -
Bva04g02954 326 Gene3D - 27 323 - -
Bva04g02954 326 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Plant peroxidase signature 242 257 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Plant peroxidase signature 33 52 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Plant peroxidase signature 57 77 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Plant peroxidase signature 258 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 ProSiteProfiles Plant heme peroxidase family profile. 23 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Haem peroxidase superfamily signature 244 259 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Haem peroxidase superfamily signature 55 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 PANTHER PEROXIDASE 25-RELATED 6 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601|GO:0042744
Bva04g02954 326 SUPERFAMILY Heme-dependent peroxidases 24 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bva04g02954 326 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Bva04g02954 326 PANTHER PEROXIDASE 6 321 - -
Bva04g02954 326 Pfam Peroxidase 41 282 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02954 Bva-Chr4 24898886 24900165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02954 18 323 Peroxidase AT2G39040 51.768 9.47e-106 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02954 K00430 - gmx:100806595 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02954 04 24898886 24900165 Bva13g02901 13 20952993 20954255 BWGD
Bva13g02357 13 17910232 17914097 Bva04g02954 04 24898886 24900165 BWGD