Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02949 ATGGGCTCCAAGCCTTGGCTATACCCGGCTCCGACCTATCGAACTCTGGAAACCACCTGGGACAACGATGAAGACGCCCCTGGCCCACGCTGCGCCCACACACTCACGGCCGTCGCTGCCACGAAGACACACGGTCCCCGTCTAATCCTATTTGGCGGTGCCACCGCAATCGAAGGAGGCTCTTCCTCTGCTCCCGGCATTCGATTGGCGGGAGTCACCAATTCAGTTCATTCCTATGATGTTCTAACAAGAAAATGGACTAGAATAAGACCCGCTGGAGAACCGCCTTCCCCTCGGGCTGCTCATGCTGCTGCTGCCGTTGGGACTATGGTTGTTTTTCAGGGCGGGATAGGTCCGGCTGGGCACTCAACTGATGATCTTTTTGTGCTTGACTTGACCAATGATAAGTTCAAGTGGCACAGAGTCGTTGTTCAAGGGCAAGGACCTGGGCCTCGATATGGCCACGTAATGGACTTGGTTGCTCAGAGATATCTTGTAACTGTTAGTGGTAATGATGGGAAAATAGTCGTGTCTGATGCTTGGGCATTTGATACTGCACAAAAACCGTACGTCTGGCAGAGGCTGACTCCAGAAGGTGATAGGCCTTCGGCTAGAATGTATGCAACTGCGAGTGCCCGCTCAGATGGTATGCTTTTGCTTTGTGGTGGAAGAGACGCTTCTGGAGCAGGGCTAGCAGATGCATATGGACTACTCATGCATATGAATGGTCAATGGGAATGGACCCTTGCACCTGGAGTTTCCCCTTCACCAAGGTATCAACATGCTGCGGTTTTTGTTGGTGCGAGATTGCATGTTACTGGAGGTGTTCTCAAGGGAGGGCGCACAGTAGAAGGTGAAGCAGCTGTTGCAGTATTGGACACTGCTGCTGGGGTTTGGTTAGACAGAAATGGTCTTGTGACCTCTTCTTCACGTACAAGCAAAGGTCGCAATGACTACGACCCTTCTTTGGAACTTATGCGTCGTTGTCGCCATGCGGCAGCTGCTGTTGGTGTTCGCATATATATTCATGGTGGTCTTAAAGGAGACATACTACTAGATGATTTTTTAGTGGCTGAAAATTCACCATATCAGTCTGAAATCAACTCTCCTGTTTTGACGTCTGAGAGAGCTTCAACTATTTCAAGCCCCAAAAGGAGTCATAATGTGACAGGAGCAGACATCTCATCTGGCAGCATGGGCTGCATGGACAAGAACTCCATGGAGAAACTGAGGGAAGCATCCGCTGCTGAGGCTGAGGCAGCAAGTGCTGTCTGGCATGCTGTACAGACTACATCAGGCATTGCTGCTGAAGAAGCATCTGTATCAGATGACAACTCACAAGCTGCAGAAACAGCTTCAGATAGCAGCGACACAGAGAGAGATGTCCGCCTTCATCCCAGAGCTGTTGTAGTTGCTAAAGAGACTGTGGGCAACCTGGGTGGAATGGTGAGACAGTTATCACTGgatcaatttgaaaatgagaGCAGACGTATGGTTCCCATAAATAATGATTCGCCATATCAAACCAAAAGGTTGACCAGGCAGAAATCCCATCAGGGTTTACATAAAAAGATAATTTCAGCTTTGCTCAGGCCTCGCAGCTGGAAAGCTCCAACAAACAGGCGGTTCTTCTTGGATTCTTATGAAGTGGGTGAGCTTTGTTATGCTGCTGAACAGATATTTATGCACGAACCGACTGTACTTCAGCTGAAAGCCCCCGTCAAAGTATTTGGTGATCTTCATGGGCAGTTTGGTGATTTGATGCGACTATTTGATGAGTACGGATTTCCTTCAACTGCAGGAGACATAACGTATATTGATTACCTGTTTTTGGGAGATTATGTTGATCGTGGACAACACAGCTTGGAGACCATTATCTTGCTTCTTGCTCTTAAGATCGAGTACCCCGAGAATGTTCACTTGATTCGTGGAAACCATGAAGCTGCCGACATAAATGCACTATTTGGTTTTCGTATTGAGTGCATTGAGAGAATGGGAGAAAATGATGGAATATGGGCATGGACACGGTTCAATCAACTTTTTAACTATCTTCCACTTGCTGCccttattgaaaagaaaattatctgTATGCATGGTGGCATAGGAAGGTCTATTAATTCAGTAGAACAGATAGAAAAGCTCGAAAGGCCCATAACAATGGATGCAGGATCTGTTATTTTAATGGACCTTTTATGGTCTGATCCCACAGAGAACGACAGCGTAGAGGGTTTGAGGCCAAATGCTAGAGGGCCTGGACTGGTCACTTTTGGGCCTGATCGTGTCACGGCATTCtgtaaaaagaacaaattacAGCTCATTATAAGGGCACATGAGTGCGTCATGGATGGATTCGAACGATTTGCCCAGGGACAATTAATAACTCTCTTTTCTGCTACTAACTATTGCGGGACGGCAAACAATGCTGGAGCTATACTTGTAGTTGGTAGAGGTTTGGTTGTGGTGCCAAAATTAATCCATCCCTTGCCACCTCCCATTCAGTCTCCAGAGACATCTCCGGAGCGCGTCACGGACGAGACATGGATGCAGGAACTTAATATGCAGAGGCCACCAACTCCTACTCGGGGTAGACCACAGCCTGACCTTGACCGTAGCTCACTTGCATACATATG 2630 0.4707 MGSKPWLYPAPTYRTLETTWDNDEDAPGPRCAHTLTAVAATKTHGPRLILFGGATAIEGGSSSAPGIRLAGVTNSVHSYDVLTRKWTRIRPAGEPPSPRAAHAAAAVGTMVVFQGGIGPAGHSTDDLFVLDLTNDKFKWHRVVVQGQGPGPRYGHVMDLVAQRYLVTVSGNDGKIVVSDAWAFDTAQKPYVWQRLTPEGDRPSARMYATASARSDGMLLLCGGRDASGAGLADAYGLLMHMNGQWEWTLAPGVSPSPRYQHAAVFVGARLHVTGGVLKGGRTVEGEAAVAVLDTAAGVWLDRNGLVTSSSRTSKGRNDYDPSLELMRRCRHAAAAVGVRIYIHGGLKGDILLDDFLVAENSPYQSEINSPVLTSERASTISSPKRSHNVTGADISSGSMGCMDKNSMEKLREASAAEAEAASAVWHAVQTTSGIAAEEASVSDDNSQAAETASDSSDTERDVRLHPRAVVVAKETVGNLGGMVRQLSLDQFENESRRMVPINNDSPYQTKRLTRQKSHQGLHKKIISALLRPRSWKAPTNRRFFLDSYEVGELCYAAEQIFMHEPTVLQLKAPVKVFGDLHGQFGDLMRLFDEYGFPSTAGDITYIDYLFLGDYVDRGQHSLETIILLLALKIEYPENVHLIRGNHEAADINALFGFRIECIERMGENDGIWAWTRFNQLFNYLPLAALIEKKIICMHGGIGRSINSVEQIEKLERPITMDAGSVILMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVTAFCKKNKLQLIIRAHECVMDGFERFAQGQLITLFSATNYCGTANNAGAILVVGRGLVVVPKLIHPLPPPIQSPETSPERVTDETWMQELNMQRPPTPTRGRPQPDLDRSSLAYI 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02949 876 SUPERFAMILY Metallo-dependent phosphatases 532 837 IPR029052 -
Bva04g02949 876 ProSitePatterns Serine/threonine specific protein phosphatases signature. 642 647 IPR006186 GO:0016787
Bva04g02949 876 MobiDBLite consensus disorder prediction 436 453 - -
Bva04g02949 876 Gene3D - 7 228 IPR015915 GO:0005515
Bva04g02949 876 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 1 876 - -
Bva04g02949 876 MobiDBLite consensus disorder prediction 829 876 - -
Bva04g02949 876 SUPERFAMILY Kelch motif 70 359 IPR015915 GO:0005515
Bva04g02949 876 MobiDBLite consensus disorder prediction 436 461 - -
Bva04g02949 876 Gene3D - 240 391 IPR015915 GO:0005515
Bva04g02949 876 PRINTS Serine/threonine phosphatase family signature 641 665 IPR006186 GO:0016787
Bva04g02949 876 PRINTS Serine/threonine phosphatase family signature 709 736 IPR006186 GO:0016787
Bva04g02949 876 PRINTS Serine/threonine phosphatase family signature 608 635 IPR006186 GO:0016787
Bva04g02949 876 PRINTS Serine/threonine phosphatase family signature 573 600 IPR006186 GO:0016787
Bva04g02949 876 PRINTS Serine/threonine phosphatase family signature 679 705 IPR006186 GO:0016787
Bva04g02949 876 PRINTS Serine/threonine phosphatase family signature 791 807 IPR006186 GO:0016787
Bva04g02949 876 PRINTS Serine/threonine phosphatase family signature 769 789 IPR006186 GO:0016787
Bva04g02949 876 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 876 - -
Bva04g02949 876 PIRSF STPPP_BSU1 1 876 IPR012391 GO:0004721|GO:0009742
Bva04g02949 876 MobiDBLite consensus disorder prediction 374 401 - -
Bva04g02949 876 Pfam Calcineurin-like phosphoesterase 573 780 IPR004843 GO:0016787
Bva04g02949 876 Gene3D - 498 850 IPR029052 -
Bva04g02949 876 SMART pp2a_7 545 831 IPR006186 GO:0016787
Bva04g02949 876 MobiDBLite consensus disorder prediction 837 858 - -
Bva04g02949 876 Pfam Kelch motif 96 133 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02949 Bva-Chr4 24879477 24886358 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02949 534 772 Calmodulin-binding Proteins AT5G63870 30.435 1.27e-27 112