Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02939 ATGAAGGAGAAAGTGGATTCCCCTGTTGGAGTTCTAGAGGATTATTTTAAGAGCTCAGCTTCAGAATCAGAAACAAGTTCTTCCAAGGAACCCATTGAAGATTCAGATGGTCAGGATAAATCAAAAAAGGGTTCTAGATGGCGTGGATTTCTCCAATTATTCAGGACCAAATCAAACAAACCCATATCCACATTGCACCCTCTCAGCGTTCTCAAGATGTCAAAAAGATTGAGCAGTAGCATGAGGGAAGTTATAATGCCAAATTATCGCTTAGATGCAGATTCGAACCACCGCTCGTCTCCGTGGAGGATCTTTACTCAGCATGAGATACAAAATGCAACCAACAATTTCAGCCAAGAAAATTTGATTGGAAAGGGTGGTTATGCTGAAGTTTACAAAGGGACTTTGTCAAACGGTCTGCTCGTAGCAATTAAACGGCTAACAAGAGGAACCCCAGATGAAATTATAGGAGACTTCTTATCAGAACTTGGCATAATGGCACATGTGAACCATCCAAACACTGCTAAACTAGTGGGCTATGGAGTGGAGGGAGGGATGTACCTTGTTCTTGAATTGTCAGAGAAAGGAAGCTTAGCTTCTGTGCTATATGGTTTGAAGGAGAAACTACCATGGTGTGTTAGGCACAAAATTGCACTGGGAACAGCAAAGGGTATATTATATCTTCACGAGGGTTGTCAAAGAAGAATTATCCACAGAGATATCAAGGCTGCAAATATCTTGCTTACAGAGGAATATGAACCTCAGATTTGTGATTTTGGGCTAGCAAAATGGCTACCAGAGGATTGGACTCACCAcactatttcaaaatttgaaggaacTTTTGGCTATCTTGCCCCTGAATACTTACTTCATGGGATAGTAGATGAGAAAACAGATGTGTTTGCCTTTGGTGTAGTGCTGTTAGAACTAGTCACTGGACGGAGAGCTCTGGATTTCTCACAGCAAAGCCTCGTTTTATGGGCGAAACCATTATTAAAGAAGAATGATATAAATGAGCTTATTGATCCTTCTCTGGATAATGACTTTGACTCTCGGCAGATGAATCTGGTGCTCTTGTCTGCTTCTCTATGCATACAGCAGTCCTCAATTCGTCGCCCATCTATGAAACAGGTTTTAGAGCTTTTAAATGGTAACCTCAGCTCTTTTAAGTGCACTAAGAAAACTCGGTTGCCATTTTTTCGAAGTGTTTTCCAGGAAGAGCTTCTTGATTCTGAGTA 1238 0.4055 MKEKVDSPVGVLEDYFKSSASESETSSSKEPIEDSDGQDKSKKGSRWRGFLQLFRTKSNKPISTLHPLSVLKMSKRLSSSMREVIMPNYRLDADSNHRSSPWRIFTQHEIQNATNNFSQENLIGKGGYAEVYKGTLSNGLLVAIKRLTRGTPDEIIGDFLSELGIMAHVNHPNTAKLVGYGVEGGMYLVLELSEKGSLASVLYGLKEKLPWCVRHKIALGTAKGILYLHEGCQRRIIHRDIKAANILLTEEYEPQICDFGLAKWLPEDWTHHTISKFEGTFGYLAPEYLLHGIVDEKTDVFAFGVVLLELVTGRRALDFSQQSLVLWAKPLLKKNDINELIDPSLDNDFDSRQMNLVLLSASLCIQQSSIRRPSMKQVLELLNGNLSSFKCTKKTRLPFFRSVFQEELLDSE 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02939 412 PANTHER OS08G0249100 PROTEIN 1 411 - -
Bva04g02939 412 Gene3D Phosphorylase Kinase; domain 1 88 191 - -
Bva04g02939 412 Gene3D Transferase(Phosphotransferase) domain 1 194 397 - -
Bva04g02939 412 ProSiteProfiles Protein kinase domain profile. 117 400 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02939 412 SUPERFAMILY Protein kinase-like (PK-like) 98 382 IPR011009 -
Bva04g02939 412 ProSitePatterns Protein kinases ATP-binding region signature. 123 145 IPR017441 GO:0005524
Bva04g02939 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Bva04g02939 412 PANTHER PROTEIN KINASE FAMILY PROTEIN 1 411 - -
Bva04g02939 412 MobiDBLite consensus disorder prediction 27 44 - -
Bva04g02939 412 SMART serkin_6 117 389 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02939 412 Pfam Protein kinase domain 118 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02939 412 MobiDBLite consensus disorder prediction 1 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02939 Bva-Chr4 24839457 24842136 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02939 105 384 Receptor kinase-like Gene Family AT1G53420 42.014 4.77e-68 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva04g02939 Pkinase 6.6e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02939 - - gmx:100780587 660.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02939 04 24839457 24842136 Bva13g02883 13 20872645 20875415 BWGD