Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02938 ATGTCGCTTCTTTTGTACCACCATCTCTTCTTCGTCTTCGCTTTCCTCACTCTTCCCCTCCTTTCCCTCTCCGCAAACGACACCGTTCTCAATGCTACTTGCCCTCTCAACTTCACCGTCATCAGCGACCTCTACGACGGCGAAAGACCGTCGTTTGATCCCGGAACTGACTGTCAGTTCATCCGCCAAGTCCTCCGTCTTGTTGAGTCCGATTATCTACGACGCACTGGCTCCTTTCTCTCGCCTCTCAACTCTTCTGACACTTGTTGGGATGATCTCCAGTCTTTCATCAATCAATACGAACCCAATTTTAATGTTAGCTCCTCTTGTCAATTCAATACCAGTTGGATTTCTCAGGGCTGCATGAACATCACAACCCGACAGCAATTCGAAAACTTGGTTGGCAATACAACCCTTCAAGATGTGCGGAGGAATTGCAATCAATCCCTAGAAAACAACTCGCCCTGCTCCCTTTGTATTACGAGCTTGTCGAGCTTGCAAGCTACCTACTTGACGGGTGACTCGACTGGAGACATTTTCCCTTGTACGGTTTATCCACAAATTTATGCCGCTGCCTTCGCCAACCAGTATGGGCCCACCGACCCAGGTACTGCTCAGTGCTTGTTCTCGCTGAAATTTTCGTCGCTGGGTTCCAACGGTAAGACACGAAAGATTGTTATTGCGATTGTTGTGACAGTTTGTGTATTGGGTCTGTCTCTAATATCTGGTGGGTTTTGGTATTATTGGAGATTgaccaagaagaagaagacgagGAAGAGTAATATTAGTAGTAAAACTGAGATGGCTTCTGGGTTGGATTCGATGAATGAAAGTACTACTTTGGTTAGATACACGTTTGATGACATTAAGAAAGCAACTAGGAACTTCTCCAGGGATAATATTATTGGCATAGGGGGATATGGGAACGTGTATAAAGGGGTCTTACCTGATGGGAGTGAAGTTGCATTTAAAAGGTTCAAGAATTGTTCAGTTGCCGGCGATGCTAGTTTCACTCATGAAGTCCAGGTTATTGCAAGCGTTAGGCATGTCAACCTTGTTGCTTTGAGAGGTTATTGTACTGCTACAACCAATTTTGAAGGTCACCAGAGGATTATTGTTTGTGATTTGATGAAGAATGGGAGTGTTCATGACCATTTGTTTGGGTCTATGGAGAAGAAACTCAGTTGGCGTATGCGTCAACGCATTGCACTAGGCACTGCAAGGGGATTGGCATATTTGCATTATGGGGCTCAACCAACTATCATCCATAGGGACATTAAAGCTAGTAatatacttctggatgagaagtTTGAAGCAAAGGTAGCAGATTTTGGACTTGCAAAGTTCAACCCTGAGGGAATGACTCATATGAGCACTAGGGTAGCTGGAACCATGGGGTATGTTGCTCCTGAATATGCATTGTATGGGCAGTTGACAGAGAGAAGTGATGTCTTTAGTTTTGGTGTTGTGCTTCTCGAGCTTTTGAGTGGGAGGAAAGCTCTTCAAACGAACGAAGAGGGCCAACCTTCTGCTCTCACTGACTGGGCTTGGTCATTAGTTAGAGCAGGTAGAGCTTTAGATGTTATCGAAGATGGTATGCCAGAACAGGGTTCACCTGAAGTTCTTGAGAAGTATGTGTTGATTGCTGTGCTTTGTTCGCATCCACAGTTATATGCTAGGCCAACAATGGATCAGGTTGTGAAAATGATGGAAACGGAGACATCAGTTCCCACAATACCGGAACGGCCAATTCCTCTTGTTGCTGAGAGGGATGATATCGAGAGAACAGCCAGCAATTGTGGCTCCGGCAACCTCTCTAGCCCAACAGGTTATCAAGCATATACATTTGAAAGCGAACTGCGTTCTTCCCATtttaaggaagaagaagaaagttctAGCCCCAGAATAGTAAGTACAGATTG 1922 0.4376 MSLLLYHHLFFVFAFLTLPLLSLSANDTVLNATCPLNFTVISDLYDGERPSFDPGTDCQFIRQVLRLVESDYLRRTGSFLSPLNSSDTCWDDLQSFINQYEPNFNVSSSCQFNTSWISQGCMNITTRQQFENLVGNTTLQDVRRNCNQSLENNSPCSLCITSLSSLQATYLTGDSTGDIFPCTVYPQIYAAAFANQYGPTDPGTAQCLFSLKFSSLGSNGKTRKIVIAIVVTVCVLGLSLISGGFWYYWRLTKKKKTRKSNISSKTEMASGLDSMNESTTLVRYTFDDIKKATRNFSRDNIIGIGGYGNVYKGVLPDGSEVAFKRFKNCSVAGDASFTHEVQVIASVRHVNLVALRGYCTATTNFEGHQRIIVCDLMKNGSVHDHLFGSMEKKLSWRMRQRIALGTARGLAYLHYGAQPTIIHRDIKASNILLDEKFEAKVADFGLAKFNPEGMTHMSTRVAGTMGYVAPEYALYGQLTERSDVFSFGVVLLELLSGRKALQTNEEGQPSALTDWAWSLVRAGRALDVIEDGMPEQGSPEVLEKYVLIAVLCSHPQLYARPTMDQVVKMMETETSVPTIPERPIPLVAERDDIERTASNCGSGNLSSPTGYQAYTFESELRSSHFKEEEESSSPRIVSTD 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02938 640 MobiDBLite consensus disorder prediction 619 640 - -
Bva04g02938 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 421 433 IPR008271 GO:0004672|GO:0006468
Bva04g02938 640 Gene3D Transferase(Phosphotransferase) domain 1 377 578 - -
Bva04g02938 640 ProSiteProfiles Protein kinase domain profile. 296 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02938 640 ProSitePatterns Protein kinases ATP-binding region signature. 302 324 IPR017441 GO:0005524
Bva04g02938 640 SUPERFAMILY Protein kinase-like (PK-like) 278 585 IPR011009 -
Bva04g02938 640 Pfam SPARK 31 171 IPR043891 -
Bva04g02938 640 CDD STKc_IRAK 302 571 - -
Bva04g02938 640 SMART serkin_6 296 570 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02938 640 MobiDBLite consensus disorder prediction 620 634 - -
Bva04g02938 640 Gene3D Phosphorylase Kinase; domain 1 254 375 - -
Bva04g02938 640 Pfam Protein kinase domain 297 511 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02938 640 PANTHER RECEPTOR-LIKE KINASE IN IN FLOWERS PROTEIN 23 624 - -
Bva04g02938 640 PANTHER OS01G0253100 PROTEIN 23 624 IPR045271 GO:0004714|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02938 Bva-Chr4 24833331 24835574 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02938 9 616 Receptor kinase-like Gene Family AT2G48010 63.993 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RKF3 Bva04g02938 Pkinase 2.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02938 - - gmx:100794233 874.389
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02938 04 24833331 24835574 Bva13g02882 13 20867485 20869660 BWGD