Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02924 ATGGACGCTGAAGCAGACCCTCCTAAAACTCCAACTAGAAGACACAAATGTTCTGCATGCTATAAGcaatacaagaaaaaggaGCATCTTATTGAGCATATGAAAGTCTCATACCACTCATTCCATCAGCCAAGATGTGAGGTCTGTCAAAAGCACTGCAAATCTTTTGAATCTCTCAGGGAACATCTCACTGGTCCATTGCCAAAAGGAAACTGTGCAAAGGTTTTCTCCCAGCGAGGTTGTCAACTTTGCTTGAAACTTTTTGATAGCCCCGGATCTCTTATTGAGCATAAAAGAACGTGTTTCCTATCTCCACCTGTTCCACTGGGAACTGTCAAATCACCCTCTATAGGATCCCAAATTTATTGTCCAGATTCTATTGATGAAAACCAGATTGGCAGATGTACTGGAGCTATTGCAATGGACTGTGAAATGGTTGGTGGTGGAGATGATGGATCACTAGACCTATGTGCTAGAATATGCCTAGTTGATGGAGacgagaaaataattttccacaGTTATGTACGACCTCAAATTCCAGTTACTAATTATAGATATGATATAACTGGGTTGACAGAAGAGCATCTTAGAGATGCCATGCCACTTAAGGCAGTTCAACAGAAGGTATTGCAAATTCTGTACAATGGAGAGTCCATTGGCAAAATTAGATTGGATGGTGGAAAGGCCAGGCTTCTTGTGGGGCACGGCCTAGATCATGATTTAGATTGCTTGAAGTTGAGCTATCCTGATCACATGTTGAGGGACACTGCAAAGTACCGTCCATTGATGAAAACAAACTTCGTCAGCCATTCACTCAAGTACCTTACCAGAACATTTCTCGGGTATGATATTCAGGGTGGCACTCATGACCCGTATGAAGATTGTGTTTCTGTTATGAGACTATACAAGAGAATCAGAGGACAACTTCATGAGGATGAAGGCTTAGGCGCATTGATTCCAAGTAACTTTATTGGCATTTCTGATTCTTGGAAATCCAAGGAAGTGGAAAATTTGTCACCAGATGAACTCTATGCCATTTCACGATCAGAGTATAACTGTTGGTGTTTGGACTCAAGGCCAAGCATGTCAGCTTG 1094 0.4077 MDAEADPPKTPTRRHKCSACYKQYKKKEHLIEHMKVSYHSFHQPRCEVCQKHCKSFESLREHLTGPLPKGNCAKVFSQRGCQLCLKLFDSPGSLIEHKRTCFLSPPVPLGTVKSPSIGSQIYCPDSIDENQIGRCTGAIAMDCEMVGGGDDGSLDLCARICLVDGDEKIIFHSYVRPQIPVTNYRYDITGLTEEHLRDAMPLKAVQQKVLQILYNGESIGKIRLDGGKARLLVGHGLDHDLDCLKLSYPDHMLRDTAKYRPLMKTNFVSHSLKYLTRTFLGYDIQGGTHDPYEDCVSVMRLYKRIRGQLHEDEGLGALIPSNFIGISDSWKSKEVENLSPDELYAISRSEYNCWCLDSRPSMSA 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02924 364 Pfam Zinc-finger of C2H2 type 45 65 - -
Bva04g02924 364 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 12 361 - -
Bva04g02924 364 ProSiteProfiles Zinc finger C2H2 type domain profile. 15 44 IPR013087 -
Bva04g02924 364 SUPERFAMILY Ribonuclease H-like 139 306 IPR012337 -
Bva04g02924 364 Gene3D Classic Zinc Finger 2 65 - -
Bva04g02924 364 CDD REX4_like 139 303 IPR037431 GO:0006364|GO:0008408
Bva04g02924 364 ProSitePatterns Zinc finger C2H2 type domain signature. 17 39 IPR013087 -
Bva04g02924 364 Pfam Exonuclease 139 302 IPR013520 -
Bva04g02924 364 PANTHER EXONUCLEASE FAMILY PROTEIN 12 361 - -
Bva04g02924 364 Gene3D - 135 314 IPR036397 GO:0003676
Bva04g02924 364 SMART exoiiiendus 137 311 IPR013520 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02924 Bva-Chr4 24767037 24771335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02924 1 358 C2H2 Transcription Factor Family AT3G27970 52.514 3.24e-139 398
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02924 K18327 - gmx:100805841 584.334