Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02882 ATGGGCTCCATCTCCATCCAAGCTGGACTCACCACCACCCATGATGCAACTACTTCTCTTTCACCTTATGCAGcttcctcttctctctttaattCTAATTCTTCTCCCTTTTCTGTTTCTGCTTATGCTTCCTCTATCGTTCCCTTTCCTCACTTTATTGATGCTTCCCTCTCCATCGCCACCAGATCTGAGCCTCACCCATCTTACCGATCCTTACCTATCGTTAATTCTCCCAAGAATACCCAAACTCAACAGCAATTATCCATCTTTACTACGTCGATGACGACTAACCCCACAAACCCACCCAAGCGGTCTACCAAAGACAGGCATACCAAGGTCAATGATCGTGGCCATAGAATTCGAATGACAGCCACCCATGCGGCTTGGGTTTTTCAATGGAGAAAGGCAACTAGATG 416 0.4471 MGSISIQAGLTTTHDATTSLSPYAASSSLFNSNSSPFSVSAYASSIVPFPHFIDASLSIATRSEPHPSYRSLPIVNSPKNTQTQQQLSIFTTSMTTNPTNPPKRSTKDRHTKVNDRGHRIRMTATHAAWVFQWRKATR 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02882 138 PANTHER TRANSCRIPTION FACTOR TCP8 14 132 - -
Bva04g02882 138 MobiDBLite consensus disorder prediction 92 114 - -
Bva04g02882 138 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 132 IPR005333 GO:0003700
Bva04g02882 138 Pfam TCP family transcription factor 105 132 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02882 Bva-Chr4 24573565 24573981 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02882 51 132 TCP Transcription Factor Family AT1G58100 43.902 1.88e-08 49.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva04g02882 TCP 1.4e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02882 - - pavi:110765678 119.398