Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva04g02875 | ATGAGAGACGCGTTGAGATCTCCGAAGCGATTGGGGAAGCCGGAGGATGACATGGTTTCAGAAGGGGGAGTAGTTGAAACAAAAAGGGATGACACAGGTCAACAGCCTTCAAATTTGACTGGTGAGGTTTTGGTGCATGAAAGAGAGACTTCCAACTTGATAGATGTAAAGGAGGAAATGGAGGTAGTAGTAAATGAAGAATCTGCCTTAGATTTGGACACGGGTACGGGTAGAGGTATTGGGGTAGATGAGAATAGGAACAAAAGAAGGAGGTTAAGTTCCGGGGATGCCATTGAAGAAGCTGGTACTGAGATGAcggagaagaagaaacaaggtTTAAATGGTAAAGTGCAGATAGGTGGTCGAGTGTTGCGGTCAATGTTAAAGAGAGAAGATGATAAGAAAACTGGGAATGGTGAGAACAATGGTGTGGTGGTAGGCGAAAGTAGAGATTCTGATGGGTTTAAGAAGATAACAGTTAAGGAAGAAGCTGATGAATTTGCTAGTGCTGGCTATCAGAAGGAAGATGATAAGTTGAGAATTAATGACAatgatgaaaagaaatcaaaacgGAAACGAGGGAGACCACCCAAAGTGGAGATGAAAGAGCAAGATCAATTAGTTGGTGAAATGCATGGCAAGCATGGAAGGCCCCCAAAAATGGAGATAAAAGAGGAATATCAATCAGTTGGTAAGTTGCCTCGCAAGCGTGGAAGGCCCcccaaaatggagaaaaaagagCAAGATCACTCAGTTGGTGAGTTGCATCAGAAGCGTGGAAGGTCCCCCAAAATGGAGATGAAAGAGCAAGATCAATCTGTTGCTGAGTTGCATCGCAAGCGCGGAAGGCCCCCCAAAATGGAGATAGAAGTGCAAAATCAATTTGCTGCTGAGTTGCATCGCAAGCGTGGAAGGCCCCCCAAAATGGAGATGGAAGAGAAAGACCAACCAGTTGGGCTTCGGAAGCGTGGAAGGCCCCCCAAAGCTGggctaaaatataatatcttcAAAGTGGCACAtcatagaaaaggaaaggtgGGTTTTGGAAGACGTAAGAAACCTTTAAAAATGAGAGATGATGATGTGTgctcaaaaaataattctggTAAAGAGTTGAAGAGCAGGAGATTTTCTACTGTCAAGAAGAGTATATTTGGGAAGACTTTGGAAACTAAGAGCAATGAGGTTGCATCGCCATTGAGATCAAATTTTGTGGAGGGACCTGTTGCAGAGAAAAACGGAAAGAGTCAGGAAAAACAGTTTGTGAGGGACAAAATAAAGGAATTGCTCTTTGCTGCGGGCTGGGAAGTTGACTATAGACCTAGGAATGGCAAAGAGTATAACGATGCTGTATATGTTAGTTTAGATAAAAAGACTCACTGGTCCATTACACTGGCCTACAATAGGCTTAAAATGCACTATGAAGCTGGTGACGGTGAAGATAAAGTATACAGGGCAGGTTTCAAATTTACACCAATACCGCAGGAGGAATTCAATATACTGACTAAAgtaattaacaagaaaagagaaagtaaaCAGGAACTGAAGCAAAAAGGGAAAGATGAGGGAAAGATGGGTAAGTCaatgaagggaaaaaagaaaaggagatgtTCACTTCTTGAAGAGGATGATCGACACATTACATCCACTAAAGGGAAGCTGCTTCTGGTGAAGGATGACAAGCgattgaaaacaaaaagcaaGAAGAGATTTGCTCCTTTGGTTCGCAACGCTGAGAAGGAGTCAGATTCTGAAGATGATGGATATATACCATATGATGGAAAACGAACTGTACTGGCTTGGATGATTGATCTGGGAACAGTCTTGCAAAATGCAAAGGTTTATTATATGAAGCGTAGAACGAAATCTAAGGTGGAGGGTAGGATTATGGGAGATGGCATTCACTGTGACTGTTGTAAGGAAATAGTAACAGTTTCAGAATTTGAAGTACATGCAGGAAGCAAACTTTGTGatccatttaaaaatatatatacagaggGAGGGACTTCCCTATTGCAATGCCTACTAGATTCATGGAATAAGCAAGATGAATCTGAACTCAAAGGTTTCCATTCCATTGATGTTGCCGGTGAAGATCCTAATGATGATACATGCGGTGTCTGTGGAGATGGTGGAGACCTGATCTGTTGTGATGGTTGCCCATCAACATTCCATCAAAGCTGCTTGGATATCAGTAAATTCCCATCAGGTGACTGGCATTGCATTTATTGCTGTTGCACATTTTGTGGGTTGTTTGGTCGAAGTACAGACCAAAATAATAGCTGTGATGATATCACTGCAGAGGCACTACTTACATGCTGTTTATGCGAGGAAAAATATCATAGGTCCTGTATTGAGGCGAACTGTGTGAAGACTGATGATTCCAGTGATGCGTCCTTCTGTGGGAAGAGATGTCAAGAGTTGTCTCAGAGACTTGAAATGCTTTTTGGGGTTAAACATGAAATTGAAGATGGTTTCTCTTGGACTTTCATTCGCCAGTCAGATGTTGGCTCTGATGCTTCTCAGCTAAAACCTGAGATGGTTGAATGCAATTCCAAACTAGCTGTTGCATTATCGGTAATGGATGAGTGCTTCAAGCCTTATATTGATCATAGAAGTGGGATTAATCTGATCCACAGTATTCTTTATAATCGTGGTTCAAACTTTAAACGCCTAAACTATGGTGGATTTTTTACTGCAATTCTAGAGAGAGGTGACGAGATCATCTGTGCTGCATCTATCAGGATTCATGGGAATGAACTAGCAGAGATGCCATTTATCGGGACTCGTCACATGTATAGGAGACAGGGAATGTGCCGCAGGCTTCTGAATGCCATTGAATCGGCACTCAGTTCGCTGAACGTCGAGTTGTTGGTCATACCAGCAATCTCAGAAATGAGGAATACTTGGACTTCAGTTTTTGGGTTTGAACCActaaaagtgaaaaacaaacgaaaaataaagaacatgAGTCTGTTGGTATTCCCTCATGTAGATATGTTACAGAAGAATATCACAGAGCAGCATCAATTTGCTGATGAAAATATGATTCCTACTGAAGTTTCCTGTCTTCAACGTCAGAAGAACCCAACAGTGCATGAAGTAGTAAGTAAATGTGATGTCGAAGGCTCATCAGGATCTGATGGGGTCCTTGGTTCGAGTGCATGCCAGGTAAATGAAACCATGTCTACTGAATTTGGTTCTCCCCGTGATAATGTCAGTGATGATGCTCATAACCAAGCTGAAGAGATAAAAACATACCAGAATGCTGATTCCAGTTGCATAGTCCTAGCACATGATGAGAAGACAGTAGATTTGGACACCCCATTGAATACTTGCGGTGATTCTAAGGAGGAGAGGCAGTGTCTCTCAATGTCCCGTATTAGCACTGAAGGTACCCAAGAAGGACGTTGTGGCAGTGGTTTCTCGCAGGGAACTGAAAATATGCACAGTGAGGGGATATTAACCGATGAAATTGTCACAAACAACAACCATGCTGTGGATTCTCCGCACCACTTGGTTGAGAGTATTCCTCCTGAATCCCGTATTGTGTTATGCTCAGGGGATTCAAAACAATCTGCTGGTGTTATCTGCCATGATTCAGAGAGTACAATTCTGTCTACTGCTGATGTGGGAACCGTGTATGATGGTTCTGTGAAGTTGCAACTTGCAGAAAGTGTTTGTGAATCAGATAAAAGAATTTCCGACTGTTGTGAACCAAGAAGCAATCTTGATTTTGTTCAGCCAGACTCTGCAGGATCAAAAGAAGTACATTCTGAATCTGCCACTGGTTGTGGTTCTCGGTGTAGACCCAATGGTGGTTGTGCCTCCAGCGAAGCTGGTCCTCCAACTTGCGTCTTGATGCACCTTAGAAAACAGAACAACCCTGATGATTTGTTTATTGATTGTAAAAAATCTTCCAATGTGGTCAGTGAGCAAAATGCTGATGAAGCAGAAGTGCTTTCTGTCAGAACAACCGATCATCAGACCAGCATAAGTAGTGTAGATAGGCAAACTGTACAGTTAACTTCACGTTCTTGTGCCGAGATTGCAAATGGCGTCAATGATAGTACGAAAGCATCTAGTGCAGCTGGTTCCGATACCCCTCTGGCTGATGGGAACATAGTTCTCAATgataaacctttgatgaaccAGTCTTCAGTAGTGGCTCTTCATTGTGCATCTGCCGATGGTACTCCatgtagtagtagtagtactGAGGCGATAGTTCTGTCAAACCAAGCTAGTTG | 4250 | 0.4028 | MRDALRSPKRLGKPEDDMVSEGGVVETKRDDTGQQPSNLTGEVLVHERETSNLIDVKEEMEVVVNEESALDLDTGTGRGIGVDENRNKRRRLSSGDAIEEAGTEMTEKKKQGLNGKVQIGGRVLRSMLKREDDKKTGNGENNGVVVGESRDSDGFKKITVKEEADEFASAGYQKEDDKLRINDNDEKKSKRKRGRPPKVEMKEQDQLVGEMHGKHGRPPKMEIKEEYQSVGKLPRKRGRPPKMEKKEQDHSVGELHQKRGRSPKMEMKEQDQSVAELHRKRGRPPKMEIEVQNQFAAELHRKRGRPPKMEMEEKDQPVGLRKRGRPPKAGLKYNIFKVAHHRKGKVGFGRRKKPLKMRDDDVCSKNNSGKELKSRRFSTVKKSIFGKTLETKSNEVASPLRSNFVEGPVAEKNGKSQEKQFVRDKIKELLFAAGWEVDYRPRNGKEYNDAVYVSLDKKTHWSITLAYNRLKMHYEAGDGEDKVYRAGFKFTPIPQEEFNILTKVINKKRESKQELKQKGKDEGKMGKSMKGKKKRRCSLLEEDDRHITSTKGKLLLVKDDKRLKTKSKKRFAPLVRNAEKESDSEDDGYIPYDGKRTVLAWMIDLGTVLQNAKVYYMKRRTKSKVEGRIMGDGIHCDCCKEIVTVSEFEVHAGSKLCDPFKNIYTEGGTSLLQCLLDSWNKQDESELKGFHSIDVAGEDPNDDTCGVCGDGGDLICCDGCPSTFHQSCLDISKFPSGDWHCIYCCCTFCGLFGRSTDQNNSCDDITAEALLTCCLCEEKYHRSCIEANCVKTDDSSDASFCGKRCQELSQRLEMLFGVKHEIEDGFSWTFIRQSDVGSDASQLKPEMVECNSKLAVALSVMDECFKPYIDHRSGINLIHSILYNRGSNFKRLNYGGFFTAILERGDEIICAASIRIHGNELAEMPFIGTRHMYRRQGMCRRLLNAIESALSSLNVELLVIPAISEMRNTWTSVFGFEPLKVKNKRKIKNMSLLVFPHVDMLQKNITEQHQFADENMIPTEVSCLQRQKNPTVHEVVSKCDVEGSSGSDGVLGSSACQVNETMSTEFGSPRDNVSDDAHNQAEEIKTYQNADSSCIVLAHDEKTVDLDTPLNTCGDSKEERQCLSMSRISTEGTQEGRCGSGFSQGTENMHSEGILTDEIVTNNNHAVDSPHHLVESIPPESRIVLCSGDSKQSAGVICHDSESTILSTADVGTVYDGSVKLQLAESVCESDKRISDCCEPRSNLDFVQPDSAGSKEVHSESATGCGSRCRPNGGCASSEAGPPTCVLMHLRKQNNPDDLFIDCKKSSNVVSEQNADEAEVLSVRTTDHQTSISSVDRQTVQLTSRSCAEIANGVNDSTKASSAAGSDTPLADGNIVLNDKPLMNQSSVVALHCASADGTPCSSSSTEAIVLSNQAS | 1416 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva04g02875 | 1416 | MobiDBLite | consensus disorder prediction | 295 | 322 | - | - | |
Bva04g02875 | 1416 | SMART | AT_hook_2 | 234 | 246 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | SMART | AT_hook_2 | 256 | 268 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | SMART | AT_hook_2 | 278 | 290 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | SMART | AT_hook_2 | 300 | 312 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | SMART | AT_hook_2 | 190 | 202 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | SMART | AT_hook_2 | 320 | 332 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | SMART | PHD_3 | 704 | 745 | IPR001965 | - | |
Bva04g02875 | 1416 | SMART | PHD_3 | 748 | 806 | IPR001965 | - | |
Bva04g02875 | 1416 | CDD | PHD1_AIRE | 705 | 744 | - | - | |
Bva04g02875 | 1416 | CDD | NAT_SF | 901 | 960 | - | - | |
Bva04g02875 | 1416 | MobiDBLite | consensus disorder prediction | 511 | 535 | - | - | |
Bva04g02875 | 1416 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 694 | 768 | IPR013083 | - | |
Bva04g02875 | 1416 | MobiDBLite | consensus disorder prediction | 511 | 528 | - | - | |
Bva04g02875 | 1416 | MobiDBLite | consensus disorder prediction | 240 | 287 | - | - | |
Bva04g02875 | 1416 | SUPERFAMILY | Acyl-CoA N-acyltransferases (Nat) | 894 | 979 | IPR016181 | - | |
Bva04g02875 | 1416 | MobiDBLite | consensus disorder prediction | 1 | 28 | - | - | |
Bva04g02875 | 1416 | Pfam | Tify domain binding domain | 627 | 676 | IPR032308 | - | |
Bva04g02875 | 1416 | PANTHER | FINGER PROTEIN, PUTATIVE-RELATED | 42 | 1296 | - | - | |
Bva04g02875 | 1416 | SUPERFAMILY | FYVE/PHD zinc finger | 691 | 745 | IPR011011 | - | |
Bva04g02875 | 1416 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
Bva04g02875 | 1416 | PANTHER | PHD FINGER PROTEIN 12 | 42 | 1296 | IPR042163 | GO:0003714|GO:0045892 | |
Bva04g02875 | 1416 | ProSiteProfiles | Zinc finger PHD-type profile. | 702 | 747 | IPR019787 | - | |
Bva04g02875 | 1416 | MobiDBLite | consensus disorder prediction | 82 | 111 | - | - | |
Bva04g02875 | 1416 | MobiDBLite | consensus disorder prediction | 67 | 328 | - | - | |
Bva04g02875 | 1416 | MobiDBLite | consensus disorder prediction | 150 | 233 | - | - | |
Bva04g02875 | 1416 | ProSiteProfiles | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 845 | 1005 | IPR000182 | GO:0016407 | |
Bva04g02875 | 1416 | Pfam | AT hook motif | 321 | 330 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | Pfam | AT hook motif | 190 | 199 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | Pfam | AT hook motif | 279 | 287 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | Pfam | AT hook motif | 234 | 245 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | Pfam | AT hook motif | 301 | 309 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | PRINTS | AT-hook-like domain signature | 232 | 243 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | PRINTS | AT-hook-like domain signature | 318 | 328 | IPR017956 | GO:0003677 | |
Bva04g02875 | 1416 | PRINTS | AT-hook-like domain signature | 190 | 200 | IPR017956 | GO:0003677 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva04g02875 | Bva-Chr4 | 24539825 | 24548689 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva04g02875 | 109 | 1008 | PHD Transcription Factor Family | AT5G36670 | 40.271 | 0.0 | 612 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva04g02875 | - | - | mtr:MTR_1g072130 | 1076.23 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva04g02875 | 04 | 24539825 | 24548689 | Bva13g02819 | 13 | 20503014 | 20512558 | BWGD |