Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02855 ATGGGTAACGCTGACTATGCGTCCCCTTCATCGGTGATGAACGTGAAGAGTTCACACAGGGTGGCCATTCCTCCGCCGCAACCATTTTTCAAGTCTCTGGGTTACTCTCTCAAAGAGACCTTCTTTCCTGATGATCCATTGAGGCAATTCAAGAACCAGCCAGCTTCTAGAAAGATTGTTCTTGGCCTTCAGTACTTCATCCCCATCTTTGAATGGGCACCTCGCTACACTCTGCAGTTCTTGAAATCCGACCTTATTGCTGGCATCACCATCGCCAGCTTGGCCATTCCCCAAGGCATCAGTTACGCCAAGCTAGCCAACCTCCCTCCCATTCTCGGCTTATACTCGAGCTTTATACCTCCGTTGATTTATGCCATGATGGGTAGCTCAAGGGATTTGGCAGTGGGGACAGTGGCGGTTGGTTCACTTCTCTTGGGTTCTATGTTGGCCAGAGCGGTTAATCCCAACGAGAATCCAAAGCTCTATCTTCATCTGGCTTTTACAGCTACATTCTTTGCTGGAGTCATTCAAGCTTCACTTGGCCTGTTTAGGTTAGGGTTTATCGTGGATTTTCTGTCACATGCAAGCATAGTAGGATTCATGGGTGGAGCTGCCACCGTGGTTTGCCTGCAACAGCTAAAATCAATTCTTGGGCTTGAGCATTTCACCCATGAAGCCGACCTTGTGTCAGTGATGCGCTCCGTTTTTAGCCAAACACATGAGTGGAGGTGGGAAAGCGCCGTGTTAGGATgtgtctttattttcttccttcttatcACCAGATACTTTAGCAAACGACAACCAAAATTCTTTTGGGTGTCCGCAATGGCGCCGTTGACGTCCGTTATCTTGGGAAGTCTGCTGGTTTATTTCACGCATGCCGAGAAGCACGGCGTTCAAGTGATAGGACAATTGAAGGAAGGACTAAATCCACCTTCCGTCACGGATCTGGTATTTGTGTCACCTTATCTAACGACAGCTATTAAAGCTGGGGCTATCACGGGCGTCATAGCCCTCGCGGAAGGAATAGCAGTGGGGAGAAGCTTTgcaatgtttaaaaattaccATATTGATGGCAACAAAGAGATGATAGCTATTGGGAGCATGAACATAGTAGGCTCTTTCACCTCTTGCTATCTCACAACAGGGCCATTTTCGAGGACAGCTGTGAACTACAACTCAGGATGCAAGACAGCAGCATCAAACATCGTAATGGCAATTGCAGTCATGTTGACATTGTTGTTTCTGACACCCTTGTTCCATTATACTCCTCTGGTGGTGCTAGCAGCCATAATTGTATCTGCAATGCTTGGCCTCATAGATTACGAAGCAGCCATCCACCTCTGGAAGATtgacaaatttgattttcttgtgTGCTTAACTGCTTTTGTCGGCGTCGTTTTTGGCAGCGTTGAACTTGGCCTCGTCATAGCAGTTGCAGTTTCTGTGCTGAGGTTACTTCTGTTTGTTGCGAGGCCAAGGACATATGTTTTAGGGAACATTCCAAATTCAGTGGTATACAGAAATGTGGAACAATACCCAAATGCCAACCATGTTCCCGGAATCTTAATTCTCGAGATTGATGCACCTATCTACTTCGCCAATGCCAGCTATTTAAGAGAAAGAATCACAAGGTGGATTGATGAAGAGGAAGACAGGGTCAAAGCTGCAGGAGAAGCCAGTTTGCAGTACGTTTTAATGGACATGACTGCTGTCGGAAATATTGATACCAGTGGAATAAGCATGCTTGAAGAAATCAAGAAGGTTAATGATAGAAGAGGGCTACAACTTGTTTTGGTGAATCCTGGAAGCGAGGTGATGAAGAAGCTCAACAAATCCAAGTTTGTTGAGGAAATAGGACAGAAGTGGATCTTTCTGACAGTTGAAGAGGCTGTGGGAGCATGCAACTACATGCTTCATACATGCAAACCCAACTCCATGAAAGGTGAATCAGAAGCTTGGAACAGTGTCTG 1973 0.4496 MGNADYASPSSVMNVKSSHRVAIPPPQPFFKSLGYSLKETFFPDDPLRQFKNQPASRKIVLGLQYFIPIFEWAPRYTLQFLKSDLIAGITIASLAIPQGISYAKLANLPPILGLYSSFIPPLIYAMMGSSRDLAVGTVAVGSLLLGSMLARAVNPNENPKLYLHLAFTATFFAGVIQASLGLFRLGFIVDFLSHASIVGFMGGAATVVCLQQLKSILGLEHFTHEADLVSVMRSVFSQTHEWRWESAVLGCVFIFFLLITRYFSKRQPKFFWVSAMAPLTSVILGSLLVYFTHAEKHGVQVIGQLKEGLNPPSVTDLVFVSPYLTTAIKAGAITGVIALAEGIAVGRSFAMFKNYHIDGNKEMIAIGSMNIVGSFTSCYLTTGPFSRTAVNYNSGCKTAASNIVMAIAVMLTLLFLTPLFHYTPLVVLAAIIVSAMLGLIDYEAAIHLWKIDKFDFLVCLTAFVGVVFGSVELGLVIAVAVSVLRLLLFVARPRTYVLGNIPNSVVYRNVEQYPNANHVPGILILEIDAPIYFANASYLRERITRWIDEEEDRVKAAGEASLQYVLMDMTAVGNIDTSGISMLEEIKKVNDRRGLQLVLVNPGSEVMKKLNKSKFVEEIGQKWIFLTVEEAVGACNYMLHTCKPNSMKGESEAWNSV 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02855 657 ProSiteProfiles STAS domain profile. 512 635 IPR002645 -
Bva04g02855 657 Pfam Sulfate permease family 81 461 IPR011547 GO:0016021
Bva04g02855 657 Gene3D STAS domain 492 637 IPR036513 -
Bva04g02855 657 CDD STAS_SulP_like_sulfate_transporter 513 628 - -
Bva04g02855 657 PANTHER SULFATE TRANSPORTER 2 654 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva04g02855 657 PANTHER SLC26A/SULP TRANSPORTER-RELATED 2 654 - -
Bva04g02855 657 TIGRFAM sulP: sulfate permease 68 631 IPR001902 GO:0015301|GO:0016020|GO:0055085
Bva04g02855 657 Pfam STAS domain 513 631 IPR002645 -
Bva04g02855 657 SUPERFAMILY SpoIIaa-like 514 636 IPR036513 -
Bva04g02855 657 ProSitePatterns SLC26A transporters signature. 110 131 IPR018045 GO:0008271|GO:0008272
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02855 Bva-Chr4 24456768 24461740 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02855 19 646 Inorganic Solute Cotransporters AT4G02700 68.998 0.0 912
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02855 K17471 - gmx:100791091 1172.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02855 04 24456768 24461740 Bva13g02804 13 20445574 20450339 BWGD