Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02849 ATGCATAGTATGATTCAATTTCAAGTATCCAAAATTCGACACCTATTCGTGCTAGGGTTTCTGCTTTCTGCAACCATTCGATTCGCTTTCGGAGAATCATCTACGTGTTTGACGGTCTACAATAAAGGCGGTGCTCCGGCGGTTTTCCAGTCTCCAAAATGCCCCCGCTGGAAGCTCTCCGATTACGATTCTCAGTCGAAGACCACGGCGCGTTGTCAGTCCGCAATGCTTCAAGGCCGAAGAAAGTCACAAGAGGATCGCACTGTTTGCGTCCTTGATATTCGCATTCCATTCCCTGGTGAAATGGGGATTAAGGAGGTTATGGTTGGAATTATAGCTGTTTTTGATGGTCATAACGGTGCAGAAGCTAGTGAGATGGCATCAGAACTTCTACTGGAGTATTTTGCTTTGCacacttattttcttctgGATGCAACTTATTCAGCTATATCAAAGAAATCAGGAACATTGGCGCATTTTGAGAGGTTTGAGAATACATTTTCAGCaaattttgatgattcttttcACTTGCGAATTTTGAAGGAAGCATTGTTAAGGGCAATCCAAGACATTGATACAAAGTTTTCTGAGAAGGAAGCTTCTAGGAGTAATCTTGTTTCGGGCTCTACAGCGACAGTCGTGTTGGTTGCAGATGATAAGATTTTGGTTGCCAATATTGGAGACTCTAAGGCCTTCTTGTGCTCTGAAAAATTTATGTCTCCTGGAGAAGCTAAAGcCTCGCTATTAAAACTGTACAGGCAGAAGGAGCATGATGGTTCTCTTTCACGCTTGTCAAATCGTGACAAGTTTAGATTGGCTTCTACCAATGGAATCACTCACTTTACAGTAAAGGAATTAACCAGTGATCATCATCCAGACAGAGACGATGAAAGAATTCGGGTGGAAACTGCTGGTGGTCAAGTTCTTAATTGGGGTGGTGTGCCTCGCATAAATGGTCAGCTGGCAATTACTCGGGCTATTGGTGATGTATCTATGAAAAGTTATGGTGTCATATCTGCACCAGAAGTGACGGATTGGCAACCTCTGACTGTTAATGATAGCTATTTGGTGGCTGCATCTGATGGTGTTTTTGAGAAGTCGAGTGTGGAAGATGTATGTGACTTGTTGTGGGAACTACACAGTCATAGTGACATAAAATCAAAGTTTTCTCCTTCATGCTCCCATTCACTGGCTGATTGTATTGTTAACACTGCCATCAAAAAGGGCAGCATGGACAATGTGGCAGCAGTTGTGGTTCCTCTGGGATCTGCTAGTTTTTCTGAAAGCTTGCTTAGGAGAAGCTCTATTGAAGAGGGTGATATAGATTGCCCGTCATTTGAACTGCCGGAATTTGCTTCCAGTAGCCCAGCTAATGCCATTATGCCTCATCAAATGCAATTGGAGCATTCTCATCCAGCAAAGACCAAATTTGGGCGTATATTGGTTGAAGTAAAACATGGTGATTTTGgatgcttttatttatctgAAAATCTTGATGATCACATAGACTATAAGCGGCACCCTGAAAAGACTGATTGGGTAGACTACTTACATGAGCTACCTCAGTCTTTACCCGATGCCCATCATCAACATTCTGATGGTcctataaatttatacaacaaCCAGAATATTTGCTTTGACCTTGGCATGGATATCAATGGAGCCAAAGATCAATGCTTTAATCCTGAAGGTTTTGCTAGTTTTCTTGGCCTGCTCGAATCAATCCCTTTACATGATACTGGTTCAAATAATGGGTCTTTTGATTATTCAACTCCTGATTTGAGGTATGTATTCAAGAGGAGAGTTGGTCGTGGATCCTATGGTGAAGTATGGTTGGCTTTCCATTGGAATTGTTATCATGGTGGCAATGTTTCAGAATGGAGTGCGGACTACAAAAATAACTCTCTTTATATTGACTCTGACTTGTACAATAGAAACAGCAGCTCACCCAATCATGATTGTGAGGATGGTCACACTAACCACAACATGTACATTTTGAAACGCATTATGGTAGAGAGAGGGGCTGCTGTTTATTTAAGTGGTCGGAGGGAGAAGtattttggagaagttttCTTAAATGCCTCTTCATGCCTTGGTGATCTTCTATCAGCTGGAAAATCAAACTGTGTTTTGGAAACctcaaaatttgacaaatttcaGCTCCAGACACTTATTTATGAAGAAGGCTTGAACCATATTGCAAGATATGTAGAATCTTTTGAGTCTCAATCCAATGAAATATGGCTTGTATTTCGATATGAAGGTGTGTCCTTGTCAAAACTTATGTATACTGTGGAAGAAGCATATGAGAGTgctgaagaaaaaattgatcaaacaAAACATGTTCGGATATTACGTCCGTCAAAGTGGTGGCATTGGTTGAAGACAACCGAAGCGGGACAACAGGAAATGCGCAACCTTATATGGCAGCTGTTAATGGCACTTAAGTCTTGTCATGATCGCAATATCACACACAGGGATATTAAACCTGagaatatGGTGATATGCTTTGAAGATGAGGAGACAGGGAGATGCTTAAAGGAGTCTGCAgctataaataagaatatttccGCCAAGATGCGTATTATTGACTTTGGCAGTGGAATAGATGAATTCACATTGAAGCATTTATATGGTTCTACCGGACCTTCTAGGGCTGAACAAACATATGAGTACACTCCTCCTGAAGCTTTGCTTAATGCTTCTTGGTACCAAGGGCCAACAAGCTCAACTATGAAATATGACATGTGGAGTGTTGGTGTGTTGATGCTAGAGTTGGTCTTGGGGACGCCAAATGTTTTCCAGATAAATGCCTTAACCCGCACTCTTCTGGACCAGCATCTTGAGGGCTGGAATGAGGGCTTAAAGGAGTTGGCGTTCAAACTTAGGTCATTCATGGAATTGTGTATCTTAATCCCTGGGATTTCTGGCAGTTCTTCAAAACAATATCGGGCAATGAACCAAGGTAGATTTTCACCCGCATCCTGGAAATGCTCTGAGGAGTTCTTTTCTCAACAAATTAAGAGTCGGGATCCTCTTAAAATAGGGTTCTCGAATATCTGGGCCTTACGGTTAGTGCGTCATCTGTTATTCTGGGACCCTgaGGATCGACTAAAATCTCATGTTGTTTTAATCTTGCTCGGAAAAGGACGGATCTGTTTCTCTGGGCCCAACTTACAGTCTCAACAATTTAAAGATTGCAAGTTTACTGGAATACTTCTGCAGGTCAAATGGAAGTGGGACGATTGCAAAATCATCTATATTGGTGTTAAAGATAGTGGTGCCAGCGGGCATATTATTTgccaaaaata 3311 0.4008 MHSMIQFQVSKIRHLFVLGFLLSATIRFAFGESSTCLTVYNKGGAPAVFQSPKCPRWKLSDYDSQSKTTARCQSAMLQGRRKSQEDRTVCVLDIRIPFPGEMGIKEVMVGIIAVFDGHNGAEASEMASELLLEYFALHTYFLLDATYSAISKKSGTLAHFERFENTFSANFDDSFHLRILKEALLRAIQDIDTKFSEEASRSNLVSGSTATVVLVADDKILVANIGDSKAFLCSEKFMSPGEAKASLLKLYRQKEHDGSLSRLSNRDKFRLASTNGITHFTVKELTSDHHPDRDDERIRVETAGGQVLNWGGVPRINGQLAITRAIGDVSMKSYGVISAPEVTDWQPLTVNDSYLVAASDGVFEKSSVEDVCDLLWELHSHSDIKSKFSPSCSHSLADCIVNTAIKKGSMDNVAAVVVPLGSASFSESLLRRSSIEEGDIDCPSFELPEFASSSPANAIMPHQMQLEHSHPAKTKFGRILVEVKHGDFGCFYLSENLDDHIDYKRHPEKTDWVDYLHELPQSLPDAHHQHSDGPINLYNNQNICFDLGMDINGAKDQCFNPEGFASFLGLLESIPLHDTGSNNGSFDYSTPDLRYVFKRRVGRGSYGEVWLAFHWNCYHGGNVSEWSADYKNNSLYIDSDLYNRNSSSPNHDCEDGHTNHNMYILKRIMVERGAAVYLSGRREKYFGEVFLNASSCLGDLLSAGKSNCVLETSKFDKFQLQTLIYEEGLNHIARYVESFESQSNEIWLVFRYEGVSLSKLMYTVEEAYESAEEKIDQTKHVRILRPSKWWHWLKTTEAGQQEMRNLIWQLLMALKSCHDRNITHRDIKPENMVICFEDEETGRCLKESAAINKNISAKMRIIDFGSGIDEFTLKHLYGSTGPSRAEQTYEYTPPEALLNASWYQGPTSSTMKYDMWSVGVLMLELVLGTPNVFQINALTRTLLDQHLEGWNEGLKELAFKLRSFMELCILIPGISGSSSKQYRAMNQGRFSPASWKCSEEFFSQQIKSRDPLKIGFSNIWALRLVRHLLFWDPEDRLKSHVVLILLGKGRICFSGPNLQSQQFKDCKFTGILLQVKWKWDDCKIIYIGVKDSGASGHIICQK 1102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02849 1102 Gene3D - 65 425 IPR036457 -
Bva04g02849 1102 SMART PP2C_4 63 418 IPR001932 -
Bva04g02849 1102 PANTHER ALPHABET, ISOFORM E-RELATED 25 583 - -
Bva04g02849 1102 Pfam Protein phosphatase 2C 279 413 IPR001932 -
Bva04g02849 1102 Pfam Protein phosphatase 2C 76 235 IPR001932 -
Bva04g02849 1102 Gene3D Transferase(Phosphotransferase) domain 1 788 1044 - -
Bva04g02849 1102 SMART serkin_6 595 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02849 1102 SUPERFAMILY PP2C-like 68 421 IPR036457 -
Bva04g02849 1102 PANTHER PROTEIN PHOSPHATASE 2C 50-RELATED 25 583 - -
Bva04g02849 1102 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Bva04g02849 1102 Pfam Protein kinase domain 793 1038 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02849 1102 SUPERFAMILY Protein kinase-like (PK-like) 594 1041 IPR011009 -
Bva04g02849 1102 ProSiteProfiles PPM-type phosphatase domain profile. 71 420 IPR001932 -
Bva04g02849 1102 ProSiteProfiles Protein kinase domain profile. 595 1053 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02849 1102 CDD PP2Cc 78 420 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02849 Bva-Chr4 24410151 24420212 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02849 670 1037 PP2C-type Phosphatase Gene Family AT3G63340 64.785 3.11e-165 490
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_GSKL Bva04g02849 Pkinase 1.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02849 - - gmx:100781476 1530.77