Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02843 ATGACGACGGGGATAGTGCAAGACCAGAACCTCGAAAAACACATAGAAAAGCAGATGGGGTGCATGGCAGGGTTTCTCCAGATCTTCGATCGCCACCAGTTACTCACCGGAAAACGCGTCTACTCTGCTAAACGACTCCCTCCATCTTCTTCGGCGTCGGATTCATCGCCGGAACCAGAGAAGTTCAATGGTTCTCCGGCGATATCCAGAGAACTGGAAAAACATCAGCCCAGATCAACAGATTCCCCTGATTGTGTGAAACAGAGTCCACCGAGGGAGCCCCAATCTCCAGTTCCAGAAACTAATACTGTGGCTGAATCTCAGGCAAAGATGCCTCTTCCTCTTCCGGTGTTTGAATTCAAGGAAGCCACAAGGTCTTCTTGGAAGTTTTCCAGAGAGGCTCCTAGGCTATCTTTGGATAGCAGAGCAGTTGTTGACGCCAAAGGAGGCCTTCACCCGAGAGAGATCCGAACAAATACAACAATGTTGTCAACAAATCGTTGTGAAAATTCTGGAGAAGGAGCAGACAGTGATATTGAGAAGCAGCGTAAATCGACAAGCGTGATAGCAAGGCTCATGGGACTTGAACCATTACCAGGTTCGGATCCTGAACCGGAGATGAGGGCAGAGCTGCGAAGATCCGCTTCTGAGTCCAGGGCGTCCAGAGATCTGTTGCAGTACCGTTTCTTTGACGTCAATAACTTTCAGCTAAGGCAGTTGCAACAGCAGGCAAATGCTCAGGGTCACATTTCAAGCAATGTGGTCCGGGACAAGGCAACAGTTGTTGATAATCGTATATCCAATAGGAGACCAACAGATCCAAAAGAATTCGGTGTACGAAATAGGAAGCCAGATGCCGCAAAAGCTCCTCACAGAGGAATAGGACAAAAGAAGAGTTTCTATGATTCTGCTGACTTTTTTCCAGAGCCAAAGCACAATATATCAATCTATGGAGAGATTGAAAAGAGGTTGAAGATGAGGGGAATTGATGAGCCATCCAAGGATCTTGAGACTCTGAAGCAAATCCTGGAGGCCCTGCAGCTCAAGGGTCTGCTACATTCAAAAAAACCCACAGCCACGGGTCAGaggaattttgtttttgatggaACCATTTCAGCAAACGAATCTCCAATTGTAGTGATGAAGCCGGCCAGATCTCCGTCTTTGTTCAATCGAACTGGAAATGATTCTCCACCGTCTAGCTTTCGGTCGAGTACTCGAGCTCGCAGGAACCTGAATCTTGGCAATGACGCTCTCCCTACAGCGAGTCCAAGGCGTGGAATGCCAGAGATTGACAGGAATATTCGGAACCAAAACAGAGTCAGAAACTCGAGCTCGCCTACACGCAGCGAGAGCGGCGTGAAGAGCCCAAACCGGAGGAGACCCGTTAACGTTAACGATTCTGGTTCAGCTGCTGATAATAGACGGGTCTCTCCGGTTCATTCACCCAAGGTTAGTTCGAGAAGGAACGCATCAGATCAACAAGTGGCATGCCGATCGCCTAGAATGAGAAAACCGACGGTTGAGATTTACCATAAGGAGGAAAAGGTATTGGCTCGGCCTCCAACAGAGGACGAATTATCCACCATTTCAGAGAGCAGCATCAGCACCGATACAGAGAGGTCCAAGTTAGAAGAGTACAAGGAAGGGAGGAGTCTACTGGAGAGGTGTGATAAGCTGCTGCACAGCATAGCGGAAATGACTGCAACCGAGTTGCAACCGAGCCCAGTCTCGGTACTTGACTCGTCGTTTTACAAAGACGAGTCTCTGTCACCTTCCCCGGTTATGAAGCGGTGCATTGATTACAAAGATCAACCAGCAGAGTCAGAAGATGATATCTGGAGTGCAGCTATGTCTTCCATTGAGGAGACGTCGGAGGACTGTGATTTCGTTTATGTATCGGAAATCCTGCGAGCTTCGAATTACTTGCCGGAAGATTGCAACATTTTCTTATTGCTCGAAAAGCAGCAACATCTCAAAGGGAAGGACACCTCGCAAACTTCCACACTAGAAAGGAGATTGATATTCGACACTATTCATGAAATCCTGAACCGAAACCGGCAACTACCGCCGTGGAAGGCAATTGTTTGGGGCAATTCTAATTCGACACCGTTTTTAGATCGAATTTGGTCCGAGTTTCGGAGGATACGAGAAAGGGATGAATCGGAGGAGGAGCTGTTCGACGTGATATGCGGTGTGTTAAGGAAGGACCTGGCCGACGACTCTATGAACGGATGGGGAGAATGCCCGATTGAGATGGGGGATACCATTTTGGATATCGAACGGCTCATATACAAGGATCTCATCGGCGAAACCATCCGAGATCTGGCGACATTTTCCGGGCAATGTAATAAAGTTGCCGCGCTCCGTAGGAAGTTGCTCTTTTG 2387 0.4801 MTTGIVQDQNLEKHIEKQMGCMAGFLQIFDRHQLLTGKRVYSAKRLPPSSSASDSSPEPEKFNGSPAISRELEKHQPRSTDSPDCVKQSPPREPQSPVPETNTVAESQAKMPLPLPVFEFKEATRSSWKFSREAPRLSLDSRAVVDAKGGLHPREIRTNTTMLSTNRCENSGEGADSDIEKQRKSTSVIARLMGLEPLPGSDPEPEMRAELRRSASESRASRDLLQYRFFDVNNFQLRQLQQQANAQGHISSNVVRDKATVVDNRISNRRPTDPKEFGVRNRKPDAAKAPHRGIGQKKSFYDSADFFPEPKHNISIYGEIEKRLKMRGIDEPSKDLETLKQILEALQLKGLLHSKKPTATGQRNFVFDGTISANESPIVVMKPARSPSLFNRTGNDSPPSSFRSSTRARRNLNLGNDALPTASPRRGMPEIDRNIRNQNRVRNSSSPTRSESGVKSPNRRRPVNVNDSGSAADNRRVSPVHSPKVSSRRNASDQQVACRSPRMRKPTVEIYHKEEKVLARPPTEDELSTISESSISTDTERSKLEEYKEGRSLLERCDKLLHSIAEMTATELQPSPVSVLDSSFYKDESLSPSPVMKRCIDYKDQPAESEDDIWSAAMSSIEETSEDCDFVYVSEILRASNYLPEDCNIFLLLEKQQHLKGKDTSQTSTLERRLIFDTIHEILNRNRQLPPWKAIVWGNSNSTPFLDRIWSEFRRIRERDESEEELFDVICGVLRKDLADDSMNGWGECPIEMGDTILDIERLIYKDLIGETIRDLATFSGQCNKVAALRRKLLF 795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02843 795 Pfam Domain of unknown function (DUF4378) 629 771 IPR025486 -
Bva04g02843 795 MobiDBLite consensus disorder prediction 195 217 - -
Bva04g02843 795 PANTHER LONGIFOLIA PROTEIN 1 795 IPR033334 GO:0051513
Bva04g02843 795 MobiDBLite consensus disorder prediction 44 110 - -
Bva04g02843 795 MobiDBLite consensus disorder prediction 386 543 - -
Bva04g02843 795 MobiDBLite consensus disorder prediction 388 418 - -
Bva04g02843 795 MobiDBLite consensus disorder prediction 203 217 - -
Bva04g02843 795 MobiDBLite consensus disorder prediction 46 62 - -
Bva04g02843 795 MobiDBLite consensus disorder prediction 267 293 - -
Bva04g02843 795 PANTHER OS11G0587300 PROTEIN 1 795 - -
Bva04g02843 795 MobiDBLite consensus disorder prediction 67 81 - -
Bva04g02843 795 MobiDBLite consensus disorder prediction 438 497 - -
Bva04g02843 795 MobiDBLite consensus disorder prediction 505 522 - -
Bva04g02843 795 MobiDBLite consensus disorder prediction 267 292 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02843 Bva-Chr4 24341995 24345607 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02843 481 795 TRM (TON1 Recruiting Motif) Superfamily AT3G63430 45.171 2.40e-71 241
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02843 - - pvy:116145870 921.383