Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02836 ATGGAAAATCCCACCGACGACTTCCTTGAACAAATTCTTGGACTCTCAAATTTTGCTTCCACTGACTCAAGCTTGGGTGGAGCTGATGCTGGTTTGGCGGGTGCGGCTGCTCCGTCTCCCATGATGCTGCAGCTCAACTCCGGGGATGGCACCGGCCACCTTGCCGCTGGCGGAACTGGTGCCAGTTGCGGCAGTGGCTTTCATGGACCAGTCTACCAGTTAGGCTTGAGCTTGGAGCAAGGAAAAGGAGGGTTTTTGAAGCCCGAGGAGGCTTCGGGAAGTGGGAAGCGTTTTCGTGACGATGTTGTTGATAGTAGAGCTAAGAATGTTTTCCCTGGCCAACCCATGCCCACTACCATTACTGCTGCTCCACACCCACCAGCAATACGACCAAGGGTACGAGCTAGACGAGGGCAGGCTACAGATCCACACAGCATAGCTGAACGGTTGCGCAGAGAAAGAATTGCAGAAAGAATAAGAGCTTTGCAGGAACTAGTTCCTAGTGTCAACAAGACAGACAGAGCTGCCATGCTTGATGAAATTGTGGATTACGTCAAGTTTTTAAGGCTTCAAGTGAAGGTTTTGAGCATGAGTAGATTAGGGGGAGCTGGTGCTGTGGCTCCTTTAGTAACAGACATCCCATTATCGTCAGTTGAGGAAGAAGGCGGTGAAGGTGGAAGAAATCAACCAGCCTGGGAGAAGTGGTCAAATGATGGTACAGAAAGACAGGTAGCTAAGCTTATGGAAGAAAATGTTGGGGCTGCCATGCAGTTCCTTCAATCAAAAGCTCTTTGCATCATGCCCATTTCATTGGCATCAGCAATATACCAATCACAGCCTCCTGACACGTCTAGTATAGTGAAACCCGAAACTAATCCTCCTTCATA 887 0.4949 MENPTDDFLEQILGLSNFASTDSSLGGADAGLAGAAAPSPMMLQLNSGDGTGHLAAGGTGASCGSGFHGPVYQLGLSLEQGKGGFLKPEEASGSGKRFRDDVVDSRAKNVFPGQPMPTTITAAPHPPAIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPSVNKTDRAAMLDEIVDYVKFLRLQVKVLSMSRLGGAGAVAPLVTDIPLSSVEEEGGEGGRNQPAWEKWSNDGTERQVAKLMEENVGAAMQFLQSKALCIMPISLASAIYQSQPPDTSSIVKPETNPPS 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02836 295 Gene3D - 134 196 IPR036638 GO:0046983
Bva04g02836 295 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 139 188 IPR011598 GO:0046983
Bva04g02836 295 SMART finulus 145 194 IPR011598 GO:0046983
Bva04g02836 295 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 137 198 IPR036638 GO:0046983
Bva04g02836 295 PANTHER BINDING PROTEIN, PUTATIVE-RELATED 4 284 - -
Bva04g02836 295 Pfam Helix-loop-helix DNA-binding domain 144 188 IPR011598 GO:0046983
Bva04g02836 295 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 4 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02836 Bva-Chr4 24298452 24302990 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02836 67 294 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G02590 82.128 1.50e-121 346
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva04g02836 HLH 1.1e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02836 - - gmx:100797789 434.876
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02836 04 24298452 24302990 Bva13g03440 13 23499587 23502619 ECH
Bva04g02836 04 24298452 24302990 Bva04g03383 04 26985449 26990457 ECH
Bva04g02836 04 24298452 24302990 Bva04g02836 04 24298452 24302990 ECH