Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02834 ATGGAGAAATATGAAAGTGAGCTGAATCTGAAGGCCACCGAGCTAAGGTTGGGATTGCCCGGAAGCGATGAGCCAGAGAAAAGTTCATGCACTAGTAATGGTGTTAGAAGTAACAAGAGATCCTCACCGGAAACCAGTGAAGAGGAATCTGTAAACAAGATTGATCACGAACAAGACAGTGCCCGCCAACCTGCAAAGGTACAAGTAGTGGGATGGCCACCTGTGAGATCTTACAGGAAGAATGTTCTTGCAGCTCATGAGAATGGTGATGGTGGAAAGTACGTGAAAGTAAGCATGGCGGGTGCAGCTTATTTGAGGAAGATTGATCTGAAGGTGTACAAGAACTACCCAGAACTGCTCATGGCGTTGGAAAAAATGTTCAAGTGCTCATTTGGTGAATATTCAGAAAGGGAAGGTTACATTAATGGATCTGAATACGCTCCTACTTATGAAGACAAAGACGGTGACTGGATGCTCGTCGGAGATGTTCCTTGGGATATGTTCATGTGCTGCTGCAAGAGACTGAGAATCGTGAAAGGATCAGAAGCAAAGGGCTTGGGTTGTTTATG 569 0.4517 MEKYESELNLKATELRLGLPGSDEPEKSSCTSNGVRSNKRSSPETSEEESVNKIDHEQDSARQPAKVQVVGWPPVRSYRKNVLAAHENGDGGKYVKVSMAGAAYLRKIDLKVYKNYPELLMALEKMFKCSFGEYSEREGYINGSEYAPTYEDKDGDWMLVGDVPWDMFMCCCKRLRIVKGSEAKGLGCL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02834 189 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 3 187 IPR003311 GO:0005634|GO:0006355
Bva04g02834 189 PANTHER AUXIN-INDUCED PROTEIN 3 187 - -
Bva04g02834 189 Pfam AUX/IAA family 43 187 IPR033389 -
Bva04g02834 189 MobiDBLite consensus disorder prediction 25 40 - -
Bva04g02834 189 Gene3D - 86 189 - -
Bva04g02834 189 MobiDBLite consensus disorder prediction 41 62 - -
Bva04g02834 189 SUPERFAMILY CAD & PB1 domains 88 177 - -
Bva04g02834 189 MobiDBLite consensus disorder prediction 1 66 - -
Bva04g02834 189 ProSiteProfiles PB1 domain profile. 92 185 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02834 Bva-Chr4 24291888 24293077 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02834 95 186 B3 DNA Binding Superfamily AT2G46530 39.130 2.50e-12 62.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva04g02834 AUX_IAA 9.2e-53 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02834 K14484 - gmx:100792134 272.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02834 04 24291888 24293077 Bva04g02834 04 24291888 24293077 ECH
Bva05g02138 05 16170228 16171761 Bva04g02834 04 24291888 24293077 ECH
Bva10g01821 10 12128248 12129769 Bva04g02834 04 24291888 24293077 ECH