Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02822 ATGGAGGAGGTCGAAGAAGCTAACAGAGTAGCTGTTCAAAGCTGTCATAGAGTTCTAAGTTTGTTGTCTCAGCCCCAGGATCAGGCTCAGTATAGGAATTTAATGGTGGAAACTGGGGAGGCTGTGGGGAAGTTCAAGAAAGTTGTTTCCCTGCTCAGTAATGGGTTGGGTCATGCAAGAGTGAGGAAGCTcaaaaaacttcaaattccTTTTCCCCACAGTATCCTCTTAGACAACCCGAACTGTAAGCCAAGCCATCTATCAAAAAGTCCGCAGTTTTTGCAAATTGGCCTTCAAgacaattcaattcaagaattGGGCTCAACCGTGAGAAATTCGCTTAGTCTGGGAAATCCATCATTGGAATTGAGTTCAAATGGGAAAAGTCCTCTGCAACTTGCCCAACAAGCGTCATCTGCGCACTATCACTTCCTTcagcagcaacagcaacagcaacTGCAACTGCAACAACATAGGTTGTTGCTACAGCAGCAACATCAAGCAGAAATGACGTTTCGAAGGAACAACAGTGGCATAAATCTGAACTTTGATAGCTCTAGCTGCACACCAACAATGTCGTCTACTAGGTCTTTCATTTCTTCCTTGAGCATAGATGGAAGTGTAGCTAACATGGATGGGAGTGCCTTCCATTTAATTGGAGCACCACACTCCTCGGATCAGAATTCACAACAGCACAAGAGAAAATGTTCTGGCAGAGGAGATGAGGGAAGCGCGAAATGTGGCAGCAGTACTAGATGCCATTGCTCAAAGAAAAGGAAACATAGAGTGAAGAGATCAATCAAAGTGCCTGCTATCAGCAACAAGCTAGCAGATATCCCTCCTGATGATTATTCATGGAGGAAGTATGGGCAGAAGCCGATCAAGGGTTCTCCACACCCTAGGGGATACTACAAGTGCAGTAGCATGAGAGGCTGCCCAGCTAGGAAGCATGTAGAAAGGTGCTTGGAAGACCCTTCGATGCTAATTGTTACCTATGAAGGCGAGCATAACCACCCTAGATTACCATCACAGTCTGCAAATGCATG 1046 0.4321 MEEVEEANRVAVQSCHRVLSLLSQPQDQAQYRNLMVETGEAVGKFKKVVSLLSNGLGHARVRKLKKLQIPFPHSILLDNPNCKPSHLSKSPQFLQIGLQDNSIQELGSTVRNSLSLGNPSLELSSNGKSPLQLAQQASSAHYHFLQQQQQQQLQLQQHRLLLQQQHQAEMTFRRNNSGINLNFDSSSCTPTMSSTRSFISSLSIDGSVANMDGSAFHLIGAPHSSDQNSQQHKRKCSGRGDEGSAKCGSSTRCHCSKKRKHRVKRSIKVPAISNKLADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSMRGCPARKHVERCLEDPSMLIVTYEGEHNHPRLPSQSANA 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02822 348 SUPERFAMILY WRKY DNA-binding domain 278 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g02822 348 Pfam WRKY DNA -binding domain 282 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g02822 348 MobiDBLite consensus disorder prediction 219 252 - -
Bva04g02822 348 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 2 347 IPR044810 GO:0003700
Bva04g02822 348 SMART WRKY_cls 280 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g02822 348 Gene3D WRKY domain 266 341 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva04g02822 348 PANTHER WRKY DNA-BINDING PROTEIN 21-RELATED 2 347 - -
Bva04g02822 348 ProSiteProfiles WRKY domain profile. 275 341 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva04g02822 348 Pfam Plant zinc cluster domain 233 278 IPR018872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02822 Bva-Chr4 24232964 24235500 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02822 1 345 WRKY Transcription Factor Family AT2G30590 57.292 1.31e-130 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva04g02822 WRKY 1.5e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02822 - - gmx:100170681 571.622
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02822 04 24232964 24235500 Bva04g02822 04 24232964 24235500 ECH