Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02821 ATGGCTGTTGACGCCCTCCAACTTCGAACGGACCCCGTCTCCGGACATCACTCCGAGCCCCCTCCGCCGCTGCCGCACGCCTCCGTGCGTTTTGGTGGATCGCTTCCCAAGGAGACGCATTTTAGGGGTGTGCGCAAGCGTCCGTGGGGCCGATTCGCCGCCGAGATCCGTGATCCGTGGAAGAAGACGCGCAAATGGCTCGGCACCTTTGATACTGCCGAGGAAGCCGCCAGAGCCTACGACGAAGCTGCCAGGACTCTCCGTGGACCCAAGGCTAAGACCAACTTCGTCTACGGTGCCGTCCTCGGTGCTCCTGCCATTTCACTTTCCCCGGCAATGGTCAGTACTGTCGGAGATGACGAAATGTTCAGAAGGCGCGTGGATTTCTGGAGGCCCCCAGTGTATTTTCCGGCGGGGATTCCGACTCGAGTTCCGGTGAGGTCGGAGTACAAGGGCTACAAGTTGGAGAATGTGGATGTAGTGGTGCTCGAGGAGGAGAAAAAAAcgaggaaggagaagaagcCGCTCATGTTTGACCTTAACCAGCCGGCACCGCCCTACTG 563 0.5755 MAVDALQLRTDPVSGHHSEPPPPLPHASVRFGGSLPKETHFRGVRKRPWGRFAAEIRDPWKKTRKWLGTFDTAEEAARAYDEAARTLRGPKAKTNFVYGAVLGAPAISLSPAMVSTVGDDEMFRRRVDFWRPPVYFPAGIPTRVPVRSEYKGYKLENVDVVVLEEEKKTRKEKKPLMFDLNQPAPPY 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02821 187 MobiDBLite consensus disorder prediction 167 187 - -
Bva04g02821 187 SUPERFAMILY DNA-binding domain 40 97 IPR016177 GO:0003677
Bva04g02821 187 Pfam AP2 domain 39 89 IPR001471 GO:0003700|GO:0006355
Bva04g02821 187 PRINTS Ethylene responsive element binding protein signature 41 52 IPR001471 GO:0003700|GO:0006355
Bva04g02821 187 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Bva04g02821 187 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 36 119 - -
Bva04g02821 187 MobiDBLite consensus disorder prediction 1 26 - -
Bva04g02821 187 Gene3D AP2/ERF domain 39 98 IPR036955 GO:0003700|GO:0006355
Bva04g02821 187 SMART rav1_2 40 103 IPR001471 GO:0003700|GO:0006355
Bva04g02821 187 CDD AP2 39 96 IPR001471 GO:0003700|GO:0006355
Bva04g02821 187 ProSiteProfiles AP2/ERF domain profile. 40 97 IPR001471 GO:0003700|GO:0006355
Bva04g02821 187 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 36 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02821 Bva-Chr4 24230451 24231566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02821 25 96 AP2-EREBP Transcription Factor Family AT1G50640 77.778 1.44e-31 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva04g02821 AP2 2e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02821 K09286 - zju:107425904 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02821 04 24230451 24231566 Bva04g02821 04 24230451 24231566 ECH