Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02806 ATGGGCGAGAAATTTTGTGTCAACGAAGAAGACAAGATTGTGGTGGAATCCGTGTTGGGTACCGAAGCCGCTGCATTTTTTATCTCGGCGGCTGCCAATAATGTCTTATCCGATGTAATTGTACCAGCAGGTGAATTGGGTAACCACCAACGTTTGTCTCAGCTTATTGAAGTGTCCAAGTGGAACTATGGCATCTTTTGGCAGGTTGTAGGGTTGAAATCTGGTGGGTCTGCTTTGATTTGGGGTGATGGGCACTGTCGGGAACCCAATTCAGGAGGTGGGGGCGAACTCAATGGAATTGGAAGGGGGGAGGAGGTGAAAAGGAAGGTACTTCAGAAGCTTCATGCTTGCTTTGGTGGGTTAAAGGAGGTTAATCCTACCAGGTTTGATAGGGTCTCAGATGTGCATATGTTTTACTTAACTTCAATGTATTATATGTTTGGATTTGATTCACCATATGGCCCTGGCAATTGCTTCAAGTCTAATAAATCAATTTGGGTTTCTGATACTGCTAACTGTTGGAATCAATATGAATCAAGATCCTTTCTGGGTAGATTGGCTGGTTTCCAAACAGTGGTTTTTGTACCTCTCAAATCTGGGGTTGTCGAGTTAGGTTCAATTGAAATGGTACCAGAAGATCAGAGTATTTTGGAGATGGTCAGAACAACATTTGGGGAATCTACTTCTGGGCAGGCAAAGGTGTTTCCCAAGATTTTTGGGCGTGAACTAAGCCTTGGGGATACAAATCCTCAGTCAATAACTGTTAGTTTCTCCCAGAAGGTGGAAGATGATTCTGGATTCACTTCAGACTCTTGTGAAGTCCAAGCAATGGGGACAAACCATGTTTATGGAAATTCTTCCAATGGCAGCAAAGGCGACATTAGTGAAGCAAACTTGTTCCCACAGTTGAATCAAATGGTTGTTGGAAATCTTAACACCCAAGGAAGGGTTTCTTCTCTGGACCTGGGGAATGACGACTTATCACCTCTCCCAGATGAGCGGAAGCCgagaaagagagggagaaaGCCAGCCAATGGGAGAGAGGAACCACTGAATCATGTAGAAGCAGAGAGACAGAGACGCGAGAAGCTTAACCAAAAGTTTTATGCTTTAAGATCTGTTGTTCCTAATATATCTAAAATGGACAAGGCATCTCTGCTTGGTGATGCCATTTCCTATATCACTGATCTCCAGATGAAGATTAAGGTATTGGAAGCTGAATCTGACATGATTGACGGCAAGGACAAGCAGTTGACGTTGTCAGATATTGATTTTCAGGCCAGACAAGATGATGCAATCGTCACAGTTAACTGTCCAATGGATACTCATCCTGTTTCTGGAGTCGTCAAAATATTCAGGGAACATCAAATTGTAGCTCAGGAGTCCAGTGTTTCAACTGCAGACAATAAGGTAATTCATACATTTTCTATTAGAAATCATGGTGGTGAGGCTGTTGCTCTGCAGTTGAAGGAGAAGCTTGAAGCTGCCTTATTGAAAGATGACTA 1505 0.4266 MGEKFCVNEEDKIVVESVLGTEAAAFFISAAANNVLSDVIVPAGELGNHQRLSQLIEVSKWNYGIFWQVVGLKSGGSALIWGDGHCREPNSGGGGELNGIGRGEEVKRKVLQKLHACFGGLKEVNPTRFDRVSDVHMFYLTSMYYMFGFDSPYGPGNCFKSNKSIWVSDTANCWNQYESRSFLGRLAGFQTVVFVPLKSGVVELGSIEMVPEDQSILEMVRTTFGESTSGQAKVFPKIFGRELSLGDTNPQSITVSFSQKVEDDSGFTSDSCEVQAMGTNHVYGNSSNGSKGDISEANLFPQLNQMVVGNLNTQGRVSSLDLGNDDLSPLPDERKPRKRGRKPANGREEPLNHVEAERQRREKLNQKFYALRSVVPNISKMDKASLLGDAISYITDLQMKIKVLEAESDMIDGKDKQLTLSDIDFQARQDDAIVTVNCPMDTHPVSGVVKIFREHQIVAQESIEGEA 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02806 467 MobiDBLite consensus disorder prediction 318 359 - -
Bva04g02806 467 PANTHER TRANSCRIPTION FACTOR BHLH3 1 462 - -
Bva04g02806 467 MobiDBLite consensus disorder prediction 327 359 - -
Bva04g02806 467 Gene3D - 341 413 IPR036638 GO:0046983
Bva04g02806 467 SMART finulus 354 403 IPR011598 GO:0046983
Bva04g02806 467 PANTHER MYC 1 462 IPR045084 GO:0003700|GO:0006355
Bva04g02806 467 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 347 411 IPR036638 GO:0046983
Bva04g02806 467 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 348 397 IPR011598 GO:0046983
Bva04g02806 467 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 49 224 IPR025610 -
Bva04g02806 467 CDD bHLH_AtAIB_like 345 407 - -
Bva04g02806 467 Pfam Helix-loop-helix DNA-binding domain 352 398 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02806 Bva-Chr4 24164466 24165971 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02806 1 462 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G16430 47.974 1.21e-149 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva04g02806 bHLH-MYC_N 3.9e-41 CL0161
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02806 - - gmx:100819968 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02806 04 24164466 24165971 Bva04g02806 04 24164466 24165971 ECH