Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02804 ATGGAATTCAGCTTCCCAGAAGACTCCAAGAGCTCCAGCGAAGAAACAGATCGATCATCAGATCAGCAAAACTATGATACGGTCACTGGCAGATCCTACGAGTGTGTCTTTTGCAAGAGAGGCTTCACTACGGCACAAGCTTTGGGTGGACACATGAATATTCACAGAAAAGATAGAGCCAAGACCAAACCCAGTTTTCCTCCTTCAAGTTCAAGCAAGGTTGTTGATGACAACTGTGCAGATCTTGGGTTTCATTCAGCAATCCGAAGTTCTCCAGGGAACTCTTATTCTACTTCTTCCGAGGTAAATGCCAATTACCATCAACTCATTTTTCCATCTTTGAGACCTTCTTATACAAATTATGGTGAGGACTTCTGTGTACAAAACCCGCGAGATCGGAACCTATTTGGAGAAGATTGGAGGAGGAGTTTGAGCTTGCATAGTAATCCATTATCTGTGTGTGAAAATAAAGGCAAGGTAGCAGACAGTGGTGAAAAGGATGGGTTGGATTTGGAGCTTCGACTTGGTTATGATccata 539 0.4286 MEFSFPEDSKSSSEETDRSSDQQNYDTVTGRSYECVFCKRGFTTAQALGGHMNIHRKDRAKTKPSFPPSSSSKVVDDNCADLGFHSAIRSSPGNSYSTSSEVNANYHQLIFPSLRPSYTNYGEDFCVQNPRDRNLFGEDWRRSLSLHSNPLSVCENKGKVADSGEKDGLDLELRLGYDP 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02804 179 Gene3D Classic Zinc Finger 8 82 - -
Bva04g02804 179 SUPERFAMILY beta-beta-alpha zinc fingers 30 60 IPR036236 -
Bva04g02804 179 MobiDBLite consensus disorder prediction 7 21 - -
Bva04g02804 179 ProSiteProfiles Zinc finger C2H2 type domain profile. 33 60 IPR013087 -
Bva04g02804 179 PANTHER OS07G0101800 PROTEIN 1 179 - -
Bva04g02804 179 MobiDBLite consensus disorder prediction 1 26 - -
Bva04g02804 179 Pfam C2H2-type zinc finger 33 57 - -
Bva04g02804 179 PANTHER TRANSCRIPTIONAL REGULATOR TAC1-LIKE 1 179 - -
Bva04g02804 179 ProSitePatterns Zinc finger C2H2 type domain signature. 35 55 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02804 Bva-Chr4 24151650 24152189 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02804 31 179 C2H2 Transcription Factor Family AT5G06070 33.529 2.43e-16 72.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva04g02804 zf-C2H2_6 1.5e-05 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02804 - - ccaj:109812060 181.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02804 04 24151650 24152189 Bva13g02728 13 20027387 20028191 BWGD
Bva04g02804 04 24151650 24152189 Bva04g02804 04 24151650 24152189 ECH