Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02800 ATGGCTTCTTCAACTGCAAATGGCAGCCCTGGCACTGGCACCGGTTCTCCTTGTGGGGCATGCAAGTTCCTCAGGCGAAAGTGCGCTGTAGATTGTATCTTTGCTCCTTATTTTTGCTCTGAACAAGGCCCTGCTAGATTTGCAGCCATCCATAAGGTGTTTGGTGCTAGTAATGTTTCCAAACTGCTGCTGCATATACCAGTTCAGGATCGGTGTGAGGCTGTTGTTACAATTGCCTATGAGGCCCAGGCAAGGATTAAAGACCCTGTTTATGGCTGTGTCTCCCACATTTTTGCCTTGCAACaacagGTGGCGTGCTTGCAGGCACAACTGATGCAAGTGAGAGCTCAGCTGGCGCAGAACCTGATGGAATCAAGAAACTCACAGAATCAATGGGCAGGGAATGTTAATGGTGGACAAGCAATAAATCCATTTACTGCCAGTTATAACATGAACCCTATATCTCCTCAGAGCTCGCTTGAGTCAATTGATCACAGCAACAGTGCAGGAATGATTATGCAAGACATACAGAGCTGCAGGGAGGATTTTTCATTCCAACCTTATTCTAAGAAAAGATCATATAACAATAATGACTTGGGTGAGCTTCAAGAACTGGCTTTCAGGATGATGAGGAACTA 638 0.4545 MASSTANGSPGTGTGSPCGACKFLRRKCAVDCIFAPYFCSEQGPARFAAIHKVFGASNVSKLLLHIPVQDRCEAVVTIAYEAQARIKDPVYGCVSHIFALQQQVACLQAQLMQVRAQLAQNLMESRNSQNQWAGNVNGGQAINPFTASYNMNPISPQSSLESIDHSNSAGMIMQDIQSCREDFSFQPYSKKRSYNNNDLGELQELAFRMMRN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02800 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 211 - -
Bva04g02800 212 ProSiteProfiles LOB domain profile. 16 118 IPR004883 -
Bva04g02800 212 Coils Coil 97 117 - -
Bva04g02800 212 Pfam Lateral organ boundaries (LOB) domain 17 114 IPR004883 -
Bva04g02800 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 16 1 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02800 Bva-Chr4 24131239 24132262 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02800 3 212 AS2 family AT2G42430 52.362 1.10e-77 231
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva04g02800 LOB 3.1e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02800 K13944 - gmx:100801508 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02800 04 24131239 24132262 Bva13g02724 13 20011026 20012049 BWGD
Bva04g02800 04 24131239 24132262 Bva04g02800 04 24131239 24132262 ECH