Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02799 ATGAGTGGTTCTGGTTCTCCCTGTGGTGCCTGCAAATTCTTGAGAAGGAAATGCGTGAGAGGCTGTGTTTTTGCTCCTTACTTTTGCCATGAACAGGGAGCAGCCCATTTTGCAGCCATTCACAAGGTCTTCGGTGCAAGCAATGTCTCTAAGCTACTTGCCCATCTCCCTGTAAGTGACCGTTGTGAAGCCGCGGTCACAATCTCATATGAAGCTCAAGCTAGACTTCAGGATCCAATTTATGGCTGTGTTTCACACATTTTTGCTCTCCAACAGCAGGTGGTTAATTTACAAGCACAGCTCGCTTGTCTCAGGGAACAAGCAGCTCAGAGCTTTCTCTGTGCCTCTGTTACTGAAAACCCTAATCATCATAAGTACTGTGAAAAACCTAACGCTTTCCCTCAAGACCTTCAATGTTTGTTCCAGACGGAAAATTCCAATATGGAACCACAATTTCTTCCTAATTTGTCTAATAATTCTGCACCAACATCACAGTGCTATGGGAACAATAGTGGTACTGTCATGGATGCAAACCCCCTTGGGAATTATGGAAATTCAGCAACTTTGGAAGAAAGCATCTGCTTTTCCAGTTTTGATGAGACTCGTAACTCCATGTCCATGTCTTATGAGGCAGATGACCTTCTATCAGTAGCTTTTGGTTACAGCCGATCTGCTACATCACGAGAGATATCAGAATCAGAATCTGCATGCATGACAAAGAATTGGTACCAATATTG 737 0.4369 MSGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFALQQQVVNLQAQLACLREQAAQSFLCASVTENPNHHKYCEKPNAFPQDLQCLFQTENSNMEPQFLPNLSNNSAPTSQCYGNNSGTVMDANPLGNYGNSATLEESICFSSFDETRNSMSMSYEADDLLSVAFGYSRSATSREISESESACMTKNWYQY 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02799 245 Coils Coil 87 107 - -
Bva04g02799 245 PANTHER LOB DOMAIN-CONTAINING PROTEIN 17-RELATED 1 224 - -
Bva04g02799 245 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Bva04g02799 245 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 224 - -
Bva04g02799 245 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02799 Bva-Chr4 24123772 24126226 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02799 7 122 AS2 family AT3G58190 83.051 2.54e-70 213
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bva04g02799 LOB 1.8e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02799 K13945 K13944 gmx:100816960 308.916
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02799 04 24123772 24126226 Bva13g02723 13 20004107 20004906 BWGD
Bva04g02799 04 24123772 24126226 Bva04g02799 04 24123772 24126226 ECH