Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02791 ATGGAACAAGTTGGTGAGATGAGAGTTAGGAATCGAGAAGCACTAGAGGTTCGATACAGAGGGATTCGTAAAAGGCCATGGGGTAAGTTTGCAGCGGAGATTCGTGACCCAACCAGAAAAGGGACTCGCTTATGGCTGGGAACCTTTGACACTGCAGAGCAAGCTGCCCGCGCTTATGATGCCGCTGCTTTTCGCTTGCGCGCTGCTGACAGCTTTGTAATAGCGGCTGCAGCTTCATCAAGAGGACAACAACGAGATCATGCCCTAGAGCTTGAATACTTGGACACAACTTTACTGAATCAATTCCTTCACCCACTAAATGATAGCTA 329 0.4863 MEQVGEMRVRNREALEVRYRGIRKRPWGKFAAEIRDPTRKGTRLWLGTFDTAEQAARAYDAAAFRLRAADSFVIAAAASSRGQQRDHALELEYLDTTLLNQFLHPLNDS 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02791 109 CDD AP2 18 53 IPR001471 GO:0003700|GO:0006355
Bva04g02791 109 SMART rav1_2 18 79 IPR001471 GO:0003700|GO:0006355
Bva04g02791 109 SUPERFAMILY DNA-binding domain 18 69 IPR016177 GO:0003677
Bva04g02791 109 ProSiteProfiles AP2/ERF domain profile. 18 77 IPR001471 GO:0003700|GO:0006355
Bva04g02791 109 PANTHER DNA-BINDING DOMAIN 11 67 IPR044808 GO:0003700|GO:0009873
Bva04g02791 109 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 11 67 - -
Bva04g02791 109 PRINTS Ethylene responsive element binding protein signature 19 30 IPR001471 GO:0003700|GO:0006355
Bva04g02791 109 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Bva04g02791 109 Pfam AP2 domain 18 68 IPR001471 GO:0003700|GO:0006355
Bva04g02791 109 Gene3D AP2/ERF domain 17 78 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02791 Bva-Chr4 24072439 24073031 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02791 16 103 AP2-EREBP Transcription Factor Family AT3G23230 44.444 2.06e-25 91.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva04g02791 AP2 1e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02791 - K09286 adu:107493082 96.6709