Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02789 atggaagaggGTAATGATTATAGAGTTGAAAGAACACAAGTTCGATACAGAGGGATTCGCAAGAGGCCGTGGGGTAAGTTTGCGGCGGAGATTCGTGATCCGACCAGAAAAGGAACTCGCATATGGCTGGGAACCTTTGACACTGCAGAAGAGGCTGCTAGGGCTTACGATAGAGCTGCGTTTCACTTTCGGGGTTGCAGAGCCATTCTCAACTTCCCCAACGAGTACCAATCTCCTGTTCCACCAGCACCACCAATATTGCCTCTTCCTCTTCGGGAATCTGGTAATGCATGTGATGCTACTTTGGAGCTTGAATACCTTGACAGCAAGTTGTTGGAAGAACTCCTTCAGGCGGATACGGATACCGATACAACTGCAAGTACTGACTTATATAAAAGTTA 401 0.4613 MEEGNDYRVERTQVRYRGIRKRPWGKFAAEIRDPTRKGTRIWLGTFDTAEEAARAYDRAAFHFRGCRAILNFPNEYQSPVPPAPPILPLPLRESGNACDATLELEYLDSKLLEELLQADTDTDTTASTDLYKS 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02789 133 CDD AP2 15 74 IPR001471 GO:0003700|GO:0006355
Bva04g02789 133 ProSiteProfiles AP2/ERF domain profile. 15 73 IPR001471 GO:0003700|GO:0006355
Bva04g02789 133 PRINTS Ethylene responsive element binding protein signature 16 27 IPR001471 GO:0003700|GO:0006355
Bva04g02789 133 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Bva04g02789 133 PANTHER DNA-BINDING DOMAIN 7 112 IPR044808 GO:0003700|GO:0009873
Bva04g02789 133 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF105 7 112 - -
Bva04g02789 133 SMART rav1_2 15 79 IPR001471 GO:0003700|GO:0006355
Bva04g02789 133 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Bva04g02789 133 Gene3D AP2/ERF domain 14 74 IPR036955 GO:0003700|GO:0006355
Bva04g02789 133 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02789 Bva-Chr4 24056304 24056705 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02789 13 119 AP2-EREBP Transcription Factor Family AT3G23230 55.462 4.63e-37 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bva04g02789 AP2 1.8e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02789 - - gmx:100500462 130.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02789 04 24056304 24056705 Bva13g02705 13 19911441 19911890 BWGD