Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02765 ATGGATTCTGCGAGGAGTTGGTTTCATAAGTTTCAGCCACGGGATAGAATGAGGACATCATCTTCAAGGAAGAAGGATGATGATTCTGTTGGAAAAGAGGGTACAAATGCACAGGAAGATGACGAATCTCTTTCCAATGTCACAAAGCAGAAGGCTGCAGCAGCAAAGCAGTACATAGAGAACCATTATAAGGAGCAAATGAAGAACCTTCAGGAGAGGAGGGAGCGTCGAAATATTTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCAGAGGAAGACCAAAACAACCTCATCAAATTTttggagaaaaaggaaactgaATATATGCGCCTTCAAAGGCATAAAATGggtgttaatgattttgaGTTATTGACTATGATAGGAAAAGGTGCATTTGGGGAGGTTAGAGTCTGCAGGGAAAAGACGACAGGTCACGTATATGCAATgaaaaaactaaagaaatCAGAGATGCTTCGTAGAGGCCAGGTAGAACATGTCAAAGCTGAAAGGAATCTCCTTGCAGAGGTTGACAGCAATTGCATTGTCAaactttatttctctttccagGATGATGAGTATCTTTATCTTATTATGGAGTATCTACCGGGTGGGGATATGATGACTCTACTCATGAGAAAGGATACCTTAACTGAAGATGAAGCCAGATTTTATGTAGGAGAAACAGTTCTGGCTATTGAATCTATACATAAACACAATTATATCCATAGGGATATTAAGCCCGATAACTTGTTACTTGATAGATTTGGTCATTTGAGACTGTCAGATTTTGGACTATGTAAACCGTTAGACTGTAGTACACTACAAGAACAAGATTTTTCTGTAGGTCAAAATGTGAATGGATCTACAGAGAATGATGAGCGTTCAGCTCCAAAACGCACTCAACAAGAACAATTACAACACTGGCAAATGAACAGGAGGACACTTGCTTATTCTACTGTTGGTACACCAGACTATATTGCTCCGGAAGTTCTTTTGAAGAAAGGTTATGGGATGGAATGTGACTGGTGGTCACTTGGGGCTATCATGTATGAAATGTTGGTTGGATATCCACCCTTTTATTCTGATGATCCAATGTCAACATGCAGGAAGATAGTAAACTGGAAATCTCACTTGAAATTTCCTGAAGAAGCAAGGTTATCTCCAGAGGCTAAAGATCTTATCAGTAAACTTTTGTGTAATGTCAGCCAGAGACTTGGATCAAAAGGCGCAGATGAAATTAAGGCTCATCCTTTCTTCCGAGGCATTGAATGGGATAAGCTATATGGAATGGAAGCTGCTTTTATTCCTGAGGTCAATGATGAGTTAGAtactcaaaattttgaaaagtttgaCGAGACTGACAGCCCAAGTCAACCTTCATCGAGATCTGGTCCATGGAGGAAGATGCTCTCATCTAAGGACTTAAATTTTGTGGGATACACGTATAAGAACTTTGAAATTGTCAATGACTATCAAGTTCCTGGGATGGCTGAATTGAAGAAAACCTCCAAAGCGAAAAGGCCATCCGTAAAAGCACTTTTTGATGAAGAATCAGATGTATCAGAGGTGCCTGAGACTTCAGAAGCGTCTGCAAGCAATCACTCTTCTCAAGGAAGCTTTATAAATCGCTTGCCACCCCAACTAGAGGCATCTCGTAGCAAGAAGAAATCCTCCTCCTA 1679 0.3865 MDSARSWFHKFQPRDRMRTSSSRKKDDDSVGKEGTNAQEDDESLSNVTKQKAAAAKQYIENHYKEQMKNLQERRERRNILEKKLADADVSEEDQNNLIKFLEKKETEYMRLQRHKMGVNDFELLTMIGKGAFGEVRVCREKTTGHVYAMKKLKKSEMLRRGQVEHVKAERNLLAEVDSNCIVKLYFSFQDDEYLYLIMEYLPGGDMMTLLMRKDTLTEDEARFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRFGHLRLSDFGLCKPLDCSTLQEQDFSVGQNVNGSTENDERSAPKRTQQEQLQHWQMNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMSTCRKIVNWKSHLKFPEEARLSPEAKDLISKLLCNVSQRLGSKGADEIKAHPFFRGIEWDKLYGMEAAFIPEVNDELDTQNFEKFDETDSPSQPSSRSGPWRKMLSSKDLNFVGYTYKNFEIVNDYQVPGMAELKKTSKAKRPSVKALFDEESDVSEVPETSEASASNHSSQGSFINRLPPQLEASRSKKKSSS 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02765 559 CDD STKc_NDR_like 119 483 - -
Bva04g02765 559 MobiDBLite consensus disorder prediction 524 559 - -
Bva04g02765 559 SMART pkinase_C_6 420 484 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva04g02765 559 ProSitePatterns Serine/Threonine protein kinases active-site signature. 240 252 IPR008271 GO:0004672|GO:0006468
Bva04g02765 559 Pfam Protein kinase domain 122 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02765 559 SUPERFAMILY Protein kinase-like (PK-like) 94 473 IPR011009 -
Bva04g02765 559 Gene3D Transferase(Phosphotransferase) domain 1 205 283 - -
Bva04g02765 559 PANTHER SERINE/THREONINE-PROTEIN KINASE 21 547 - -
Bva04g02765 559 ProSiteProfiles Protein kinase domain profile. 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02765 559 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Bva04g02765 559 MobiDBLite consensus disorder prediction 1 53 - -
Bva04g02765 559 Gene3D Transferase(Phosphotransferase) domain 1 311 437 - -
Bva04g02765 559 Pfam Protein kinase C terminal domain 438 482 IPR017892 GO:0004674|GO:0005524|GO:0006468
Bva04g02765 559 MobiDBLite consensus disorder prediction 506 559 - -
Bva04g02765 559 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 21 547 - -
Bva04g02765 559 SMART serkin_6 121 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva04g02765 559 MobiDBLite consensus disorder prediction 282 302 - -
Bva04g02765 559 ProSiteProfiles AGC-kinase C-terminal domain profile. 420 492 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva04g02765 559 Coils Coil 63 83 - -
Bva04g02765 559 Gene3D Phosphorylase Kinase; domain 1 92 204 - -
Bva04g02765 559 Gene3D Phosphorylase Kinase; domain 1 438 448 - -
Bva04g02765 559 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02765 Bva-Chr4 23935087 23941962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02765 1 514 AGC Kinase Gene Family AT2G20470 79.537 0.0 860
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Bva04g02765 Pkinase 6.2e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02765 K08790 - jre:108982626 954.125
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02675 13 19747803 19754130 Bva04g02765 04 23935087 23941962 BWGD
Bva04g02765 04 23935087 23941962 Bva04g02765 04 23935087 23941962 ECH