Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02751 ATGGGTGTCGCTGTTTATTGCCTGTGGGCTCGAAGcctctgcttttctttttggaaaaacaaaagATTTTTGTGTCAACAAAAACACTATGGGGAGCAATTAAGAAGAGTAGATGAGGTGGTTCCTTCATCTGCATCTCTTGCATCCCAGGATTATTCAGCAAGTGGGTGTTCTTCCCGTGCAGGGCAAGTTGACAAGAAGCCTGATACTGGCAATATAGAAGAAGCTGAATCATCCCTACGCGAGAGTGATTTCCTGAATTATGAGGAAGCCAGAGCTTTATTAGGAAGATATGAAtatcaaaaaggaaatatacGAACTGCTTTACGTGTTTTTGAGGGAATAGATATAGGGTTCGTCactcagaaaatgaaaattacacTTGCCCAAACAGTAGAACGCCGTAAGAGACGTTCCCAGAATTTTGATACACCGCCAATGTCGATACATGCTGTTGGCTTACTATTGGAAGCATCCCTTATAAAAGCAAAATGCTTGCAGGTCCTTGGAAGGTTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGAATCTTCATTACCCAATGGCTTGCCTGAAAATTTTGGTGCTGAATGTAAATTGCAGGAGACTCTAAGCAAGGCAGTTGAGTTGCTTCCAGAATTATGGAAACTTGCTGATTGTCCACGTGAAGCTATTTTGTCTTATCGACGGGCACTACTTTATCACTGGAATCTTGATGCAGAGACTACAGCAAAGATTCAGAAAgagtttgttgtttttctcctATATAGTGGTGGTGGGGAAGCAGACCCCCCAAATCTCCGTTCCCAAATGGACAGCTCATTTGTACCCCGAAACAACATTGAAGAGGCCATACTTCTATTAGTGATTCTGCTAAGAAAAGTCTCTCTCAATAGAATTGAGTGGGATCCTTCCATTTTGGACCACCTTTCATTTGCTTTATCTGTTTCAGGAGACTTGATAACTTTAGCCCATCAATGGGAAGAATTACTCCCTGGGGTTATTGATCGAAAAGAAAGGTATCACATTCTTGCTCTCTGTTATTATGGGGCAGGTGAGGACTTGGTAGCACTGGATCTTCTGAGAAAATTGTTGAGTGGTAGAGAGGACCCAAGACATGTTAGAGCTCTGCTAATGGCATCTAAGATTTGTTGCGAGAACCCCAGTCTTGCTGGAGAAGGGGTAAGCTTTGCTCACAGAGTGCTTAAGAACTTGGATGGTGGATGCGATCAGTTACAAGATCTTGCCAATTGCCTACTTGGTGTTTCACTTTCAGCACATTCAAAATCTGCTGTTTCTGATTCTGAGAGGTCAAAGAGACAATCCGAGGCACTTCATGCTCTGGAAATTGCGGGCAGATTGAGCAGAATGAGAGACCCTATTATACCCTACTATCTCAGTTTGCAATATACAGAGCAAAGGGAGTTGGATTGTGCATTTTATCATGCTAAATGCTTTTTAAAACTGGAATCTGGGTCTATTGTTAAAGGGTGGTTATTGTTGGCCAGGATATTATCAGCTCAAAAAAGGTTTTCAGATGCTGAATCTATTATTAATGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGAGATCTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGATCAGTTAAGGAGTGCCATTGAGACGTATGCTCAGCTTCTTGCTATTCTTCAAATTCAGAGTAAAAGTTTTGGTTCTGTGAATAAGCTATACAAGGACAGCAGAGATCATGCTAGGGACTTGGAAGCGCAAATATGGCATGATCTTgcttatatatacataagcCTGTCTCGGTGGCATGATGCCGGGGTCTGTCTTGCCAAATCTAAGGCTATCAAACTGTACTCTGCAACTAGATGTCACGTGAccgGTAAACTCTACGAAGCAAGGAGCCTTCATGAAGAGGCTCTAGAAGCTTTTCAGTATGCTTTGGGCATTGATCCAGACCATGTCCCAAGCTTAATGTCCACTGCTGTGGTTCTTAGAAGGTGTAATGACAAATCAAATGCCATTGGTAGAAGCTTTCTGATGGGTGCACTACGGCATGATAGAATGAATGCTTCTGCTTGGTACAATCTCGGCCTTCTTTGTAAGGCCGAGGGTTTAGTAGTAGAAGCTGCAGAGTGTTTTCAAGCAGCGTACTCGCTTGAAGAGTCTGACTCTGCGCCAATTGAACCTTTCAGATG 2210 0.4086 MGVAVYCLWARSLCFSFWKNKRFLCQQKHYGEQLRRVDEVVPSSASLASQDYSASGCSSRAGQVDKKPDTGNIEEAESSLRESDFLNYEEARALLGRYEYQKGNIRTALRVFEGIDIGFVTQKMKITLAQTVERRKRRSQNFDTPPMSIHAVGLLLEASLIKAKCLQVLGRFKEAAQSCKVILDIVESSLPNGLPENFGAECKLQETLSKAVELLPELWKLADCPREAILSYRRALLYHWNLDAETTAKIQKEFVVFLLYSGGGEADPPNLRSQMDSSFVPRNNIEEAILLLVILLRKVSLNRIEWDPSILDHLSFALSVSGDLITLAHQWEELLPGVIDRKERYHILALCYYGAGEDLVALDLLRKLLSGREDPRHVRALLMASKICCENPSLAGEGVSFAHRVLKNLDGGCDQLQDLANCLLGVSLSAHSKSAVSDSERSKRQSEALHALEIAGRLSRMRDPIIPYYLSLQYTEQRELDCAFYHAKCFLKLESGSIVKGWLLLARILSAQKRFSDAESIINAALDQTGKWDQGDLLRTKAKLQIAQDQLRSAIETYAQLLAILQIQSKSFGSVNKLYKDSRDHARDLEAQIWHDLAYIYISLSRWHDAGVCLAKSKAIKLYSATRCHVTGKLYEARSLHEEALEAFQYALGIDPDHVPSLMSTAVVLRRCNDKSNAIGRSFLMGALRHDRMNASAWYNLGLLCKAEGLVVEAAECFQAAYSLEESDSAPIEPFR 736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02751 736 ProSiteProfiles TPR repeat profile. 695 728 IPR019734 GO:0005515
Bva04g02751 736 PANTHER PROTEIN NPG1 26 736 IPR043376 -
Bva04g02751 736 SMART tpr_5 499 532 IPR019734 GO:0005515
Bva04g02751 736 SMART tpr_5 625 658 IPR019734 GO:0005515
Bva04g02751 736 SMART tpr_5 695 728 IPR019734 GO:0005515
Bva04g02751 736 SMART tpr_5 535 568 IPR019734 GO:0005515
Bva04g02751 736 SMART tpr_5 156 189 IPR019734 GO:0005515
Bva04g02751 736 SUPERFAMILY TPR-like 443 560 IPR011990 GO:0005515
Bva04g02751 736 ProSiteProfiles TPR repeat profile. 625 658 IPR019734 GO:0005515
Bva04g02751 736 Gene3D Tetratricopeptide repeat domain 25 621 IPR011990 GO:0005515
Bva04g02751 736 Gene3D Tetratricopeptide repeat domain 622 732 IPR011990 GO:0005515
Bva04g02751 736 MobiDBLite consensus disorder prediction 50 75 - -
Bva04g02751 736 PANTHER PROTEIN NPGR2 26 736 - -
Bva04g02751 736 SUPERFAMILY TPR-like 537 727 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02751 Bva-Chr4 23881619 23886002 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02751 31 736 Calmodulin-binding Proteins AT4G28600 58.252 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02751 K21843 - gmx:100800762 1006.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva13g02662 13 19671220 19676368 Bva04g02751 04 23881619 23886002 BWGD
Bva04g02751 04 23881619 23886002 Bva04g02751 04 23881619 23886002 ECH