Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02743 ATGGAAGCACGTCCTGCATTCTCCATTGAGAGATCAAGTGCAAAGCAACTGACTAACATGGGGGTGTCTGGAGCACTCTCTTCGTCCTTGCCAGTCCTCCCAACACACCTGGAAGAGATGTTTCCCAAGTTGCCAGAGAAAGAGCTTATGACAAGACCTCTCACCAATTCAAGTCATTTAAATTCCAGCGGAGTAGTTGGTCACATGTTTTCATCATCCCCTGGATATTCAACTGATCTTCATCACTCTTCCCTTTCTCCCCGTGAGAAACACTCAAGAAATGCTCATTTTATTTCACAGTCATCTAGTGACATGGGGTCATTGCCATTATCCTATTCAAATATTGGACCACTACCCTCTACAATGTCAAGTCATCATGCAAATGAGAACAGCTCTCTCTGGAATACAGATTCATCACCGAGCTTTCTCGATTTTCCCGTAAATACCTCTATTGAGAGTAGTCAAGTAGAAAACAGTGCCGGCACTATGATGGCATCCGGAGAGTATTGTAAACGAAATGATTGGCAGGATTGGGCTGACCAACTAATTAGTGATGATGAAACCTTGGCTTCTAACTGGAATGATCTTCTTCTTGATACCAACATTCATGATCTTGAACCAAAGGTGGCATGCCAGGTTTCGAAACCGTCATCACAGTTTCTGGGGCAGCAGTCCATAGGTCAGCAGGTTGTTCCTGCTCCATTTGGAGATAATTGTGCTAGTGCTTCCCAGTCTTCCTCAGGAAACTCTGCCCCTGCTAAGCCACGGATGCGTTGGACACCAGAGCTTCATGAGGCCTTTGTGGAAGCTGTCAACCAGCTTGGTGGGAGTGAAAgAGCTACACCTAAAGGTGTTCTGAAGCTCATGAAAGTTGAAGGCTTAACTATATATCATGTTAAAAGCCACCTGCAGAAATACAGGACAGCTAGATATAGACCTGAAACATCAGAAGGATCCTCAGAGAAAAAGGTTACTTCTGTTGAAGAGATGTCATCTTTGGACTTGAAAACTAGTCTCGATATCACTGAAGCTCTGCGAATGCAGATGGAGGTTCAGAAACGGCTGCATGAACAGCTCGAGATACAACGAAATCTACAGTTGCGAATTGAAGAACAAGGAAGGTACCTCCAGATGATGTTCGAGAAGCAATGCAAACCTGGCAATGAAAAGTTAAAGGCGTCATCGTCTAGTTTGGAGAGTCCCTCGGCAGCTACTTCAGAGGCTATTAAAGATTCTTCTGCTAAAAGTGAAATGGAAGCCTCCAAATTGGAGCATTCCAAGACAGAACATGAGCAAACTGACTGCAGTATCACCATTGAAGAAAGCTTACAGTCACAGGAAGTGGGTGCGAAGTATAATGCTCccgaaactaaaaaagtttCTGAGATTTCTGAGCCACAGCCACATGACGGTGAAGATGATACTCAAGCCTCAAAGCGTCAAAGGACAGATGAATA 1457 0.4393 MEARPAFSIERSSAKQLTNMGVSGALSSSLPVLPTHLEEMFPKLPEKELMTRPLTNSSHLNSSGVVGHMFSSSPGYSTDLHHSSLSPREKHSRNAHFISQSSSDMGSLPLSYSNIGPLPSTMSSHHANENSSLWNTDSSPSFLDFPVNTSIESSQVENSAGTMMASGEYCKRNDWQDWADQLISDDETLASNWNDLLLDTNIHDLEPKVACQVSKPSSQFLGQQSIGQQVVPAPFGDNCASASQSSSGNSAPAKPRMRWTPELHEAFVEAVNQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPETSEGSSEKKVTSVEEMSSLDLKTSLDITEALRMQMEVQKRLHEQLEIQRNLQLRIEEQGRYLQMMFEKQCKPGNEKLKASSSSLESPSAATSEAIKDSSAKSEMEASKLEHSKTEHEQTDCSITIEESLQSQEVGAKYNAPETKKVSEISEPQPHDGEDDTQASKRQRTDE 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02743 485 MobiDBLite consensus disorder prediction 387 485 - -
Bva04g02743 485 MobiDBLite consensus disorder prediction 310 329 - -
Bva04g02743 485 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 254 308 IPR006447 GO:0003677
Bva04g02743 485 Gene3D - 253 312 - -
Bva04g02743 485 SUPERFAMILY Homeodomain-like 252 308 IPR009057 -
Bva04g02743 485 PANTHER PROTEIN PHR1-LIKE 1-LIKE ISOFORM X1 27 485 - -
Bva04g02743 485 MobiDBLite consensus disorder prediction 310 331 - -
Bva04g02743 485 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 27 485 IPR044848 GO:0003700
Bva04g02743 485 Pfam Myb-like DNA-binding domain 256 307 IPR001005 -
Bva04g02743 485 Pfam MYB-CC type transfactor, LHEQLE motif 340 385 IPR025756 -
Bva04g02743 485 MobiDBLite consensus disorder prediction 437 451 - -
Bva04g02743 485 MobiDBLite consensus disorder prediction 412 436 - -
Bva04g02743 485 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 251 311 IPR017930 -
Bva04g02743 485 MobiDBLite consensus disorder prediction 389 411 - -
Bva04g02743 485 MobiDBLite consensus disorder prediction 462 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02743 Bva-Chr4 23837385 23841902 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02743 1 468 G2-like Transcription Factor Family AT4G28610 45.625 5.06e-108 325
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva04g02743 Myb_DNA-binding 9.1e-09 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02743 - - gmx:100793593 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02743 04 23837385 23841902 Bva13g02646 13 19600377 19605554 BWGD
Bva04g02743 04 23837385 23841902 Bva04g02743 04 23837385 23841902 ECH
Bva04g02743 04 23837385 23841902 Bva13g02646 13 19600377 19605554 ECH