Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02733 ATGCAGGGTGCCGATGGCAGCGTTGGAGCATTTTCCGGTGATTCTAAGATTTCAACGGTGTCTAAAGATCATAACTTGGTCCTCTCTTCGGAGGATTCGTCATGCCCGGATGAGTCTGACCTTGAATTGGGTCTTGGGTTAAGTCTTTCTCGTCCATGTGCTAAGTCCCACCCAACTTCAACAGCTCAATATGCAAGAATTCTTACGGCCGAGGATTTTCCTTCTGCAGTTTCTTCTACTTCTGGGTCTTCaacttcttcctcctcttcctcttcgACTCCTTCCTCGTGGAGTAGGGCTAACGTCACAGCTGGTGCCAAGAGAACTGCTGATTCCTCTGTCGCCAATAACGGTCCCAGTCAGGTTGTAGGATGGCCTCCCGTTGGAGCATATAGAATGAATAGCTTCAACAACCATGGAAAATCACCAGCTACCGAAGCATTCAACTCAATGATTGAGAAAACTAAGAGCAATAATGCTGCAGTGAGGAACAATACTGACAATGGCAGTGATAAAAACATTAGTGCCAAAGATAAAGGACACCCCAGGAGTTCCCTGTTTGTGAAGGTAAATATGGATGGGGTAGCAATTGGAAGGAAGGTTGATTTGAGTGCTCATAGTTCCTATGATTCCTTAACACGAACTTTGGAGGATATGTTCGGTGAATCCACTACAGGCGTTTCTTGCAATAGATCAAATGGGGAGGATCCTGGCGTTAAAGTTGGAGCAGAAAGACAGTCAAAGATGCTTGACGGATCTTCCAAGTTTGTCCTCACTTATGAAGATAAGGAAGGAGACTGGATGCTTGTTGGAGATGTTCCTTGGAgGATGTTCGTTAGCTCTGTGAAGAGACTGAGAATCATGAGGACATCAGACGCTAATGGACTTGCACCAAGATTGGAAGAAAAGAACAGCAGGCAGAAAAGCTA 929 0.4413 MQGADGSVGAFSGDSKISTVSKDHNLVLSSEDSSCPDESDLELGLGLSLSRPCAKSHPTSTAQYARILTAEDFPSAVSSTSGSSTSSSSSSSTPSSWSRANVTAGAKRTADSSVANNGPSQVVGWPPVGAYRMNSFNNHGKSPATEAFNSMIEKTKSNNAAVRNNTDNGSDKNISAKDKGHPRSSLFVKVNMDGVAIGRKVDLSAHSSYDSLTRTLEDMFGESTTGVSCNRSNGEDPGVKVGAERQSKMLDGSSKFVLTYEDKEGDWMLVGDVPWRMFVSSVKRLRIMRTSDANGLAPRLEEKNSRQKS 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02733 309 MobiDBLite consensus disorder prediction 75 120 - -
Bva04g02733 309 Gene3D - 180 302 - -
Bva04g02733 309 MobiDBLite consensus disorder prediction 157 171 - -
Bva04g02733 309 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 19 301 IPR003311 GO:0005634|GO:0006355
Bva04g02733 309 Pfam AUX/IAA family 59 299 IPR033389 -
Bva04g02733 309 MobiDBLite consensus disorder prediction 157 180 - -
Bva04g02733 309 MobiDBLite consensus disorder prediction 75 123 - -
Bva04g02733 309 PANTHER AUXIN-RESPONSIVE PROTEIN IAA11 19 301 - -
Bva04g02733 309 SUPERFAMILY CAD & PB1 domains 183 288 - -
Bva04g02733 309 ProSiteProfiles PB1 domain profile. 185 292 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02733 Bva-Chr4 23800401 23802901 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02733 189 301 B3 DNA Binding Superfamily AT3G61830 31.858 2.42e-12 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Bva04g02733 AUX_IAA 1.8e-62 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02733 K14484 - gmx:100779400 364.385
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02733 04 23800401 23802901 Bva13g02629 13 19534105 19537358 BWGD
Bva04g02733 04 23800401 23802901 Bva04g02733 04 23800401 23802901 ECH