Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02726 ATGGCAATCATTCAATTCCTCAATAAATTCTCAGCTTTGTCAACAGCATCAGGATCGTCCAATGCCCTTCTGAGAACGATCGTAGGAACGCCAATATTGGAAGTTGCGGCAATCTGCGTCAATTTGAGCCTGCTTCTTGTATTTCTATTTGTTGTGTCGGCCAGACAAATATCCGTATGTTTTGGTCGAATCCGAATTAGAAAGGACAATACAGCTAGCAATACAAGCCCAATCCGCCACAGTATTGATGGAGAAATTCATGATGTCAAAATCGGTTCTGGTTACAAATTGTCAGTGTTGTGTTGTTTCTATGTGCTCTTTGTTCAAGTTTTGGTGTTAGGATTTGATGGGGCTGCTTTAATCAGGAAAGCAGCTAATGGCAAGGATGTAGACTGGTCTGTCCCTGCTTTGCCAGCTGCACAGGGTTTAGCTTGGTTTGTATTAAGCTTCTCGGCTTTGCATTGCAAATTCAAGCTGTCCGAGaagtttccatttttgttGAGGGTTTGGTGGGTTGTGTCgtttgtaatttgtttatgtACTTTATTTGTTGATGGTAGAGGATTTTGGGTGGAAGGTTCAAAACACCTGCGTCCTCATGTTGTGGCAAATTTCGCTGTCACTCCGGCTCttgcctttttgttttttgttgcACTTAGGGGTGTTACTGGTATACAAGTTTGTAGAAACTCTGATCTTCAAGAGCCATTACTTCTTGAAGAAGAACCAGGGTGTCTCAAGGTTACTCCTTATAGTGATGCTGGGCTTTTTAGCTTGGCCACTCTTTCTTGGCTTAACCCGCTTCTTTCCATTGGAAAAATGAGGCCGCTCGAGCTTAAGGACATTCCCCTTCTTGCGCCAAAAGATCGATCCAAGACAAATTATAAGGTTTTGAATTCTAACTGGGAGAGATTGAAGTCCGAAAATCCCTCTAAGCAGCCTTCATTAGCTTGGGCAATTCTTAAGTCATTCTGGAAGGAGGCAGCTTGCAATGCCATCTTTGTCGGTGTCAATACTATTGTCTCATATGTAGGCCCATACATGATTAGCTACTTTGTTGATTACTTGGGAGGTGAAGAGACTTTCCCTCATGAAGGTTACATCCTGGCTGGGATATTCTTTGCTGCTAAGCTTGTGGAGACCTTGACAACTCGGCAATGGTACCTTGGGGTGGACATCTTGGGAATGCATGTTAGGTCTGCTCTAACGGCTATGGTTTATCGCAAGGGACTTAGGTTGTCCAGCTTGTCCAAGCAAAGTCACACAAGTGGGGAGATTGTCAATTACATGGCTGTTGATGTTCAGAGAGTTGGGGACTACACTTGGTATCTCCATGACATATGGGTCCTACCTCTGCAAATTGTTCTTGCTCTTATGATTTTGTATAAGAACATTGGAATTGCTTTTATTGCGACTTTGATTGCAACAATCATTTCGATTGTTGTCACCATTCCTGTGGCTCAAgtacaagaaaattttcaggaCAAACTAATGGCGGCTAAGGatgaaagaatgagaaaaacaTCCGAGTGTCTAAGGAATATGAGGATTCTCAAGCTGCAAGCTTGGGAGGATAGGTATCGAATGGAATTGGAGGAGATGCGTGGAGTAGAGTTCAAGTGGCTTCGCAAAGCTCTCTATTCTCAGGCTTTCATTACTTTCGTCTTCTGGAGCTCCCCTATATTTGTTTCAGCTGTCACTTTTGCTACTTGCATATTGTTGGGAGGTCAGCTGACAGCAGGTAGTGTTCTTTCTGCTCTGGCTACTTTCAGGATTCTCCAAGAACCTCTCAGGAATTTTCCTGACTTGGTATCGACGATGGCTCAGACAAAAGTTTCTCTTGATCGCATATCTGGTTTCCTACTGGAGGAAGAGTTGCAGGAAGATGCAACTATCATCTTGCCACGAGGGATTTCTGATATTGCCATTGAGATTAAAAATGGGGTATTCTGCTGGGATCCTTCTTCTTCTAGGCCTACTCTATCTGGGATACAGGTGAGTGTGGAGAGGGGCATGCGTGTGGCTGTTTGTGGCATGGTTGGTTCTGGGAAATCAAGTTTCCTTTCCTGCATCCTTGGCGAGATTCCAAAGCTTTCTGGTGAAGTAAGAGTGTGTGGCTCTTCTGCATATGTCCCGCAATCAGCATGGATACAATCAGGAaacatagaagaaaatattctcTTTGGGAGCCCGATGGATAAAGCAAAGTACAAGAAGGTTCTTCATGCTTGTTCACTGAAAAAGGATCTGGAACTTTTCTCACATGGAGACCAGACAATTATCGGTGACAGAGGTATAAACCTCAGTGGTGGCCAAAAGCAGCGGGTGCAGCTTGCAAGAGCACTCTACCAGGATGCTGATATTTATCTCCTTGATGACCCCTTCAGTGCCGTTGATGCCCACACTGGATCAGAATTGTTTAGGGAGTACATATTGACAGCACTAGCAGATAAGACAGTTGTTTTTGTTACCCATCAAGTCGAATTTCTTCCTGCTGCTGATGTGATACTGGTTCTTAAAGAAGGTCGCATTATACAGGCAGGAAAATATGATGATCTTTTGCAAGCTGGAACAGATTTTAATACTCTAGTCTCAGCTCATCATGAAGCAATTGAGGCTATGGATATCCCTAATCACTCCTCAGAAGATTCAGATGAATTCTCGGAGTCATCTGttatatccaataaaaaatctatCGCATTGGCAAATGACATTGACAGTTTAGCAAAGGAGGTGCAAGAGGGTACATCAGCTTTAGATAAGAAGGCaatgaaggagaagaaaaaagcaaaacgCTCAAGAAAGAAACAGCTTGTTCAGGAAGAGGAGAGGGTAAGAGGTCAAGTCAGTATGAAAGTGTACTTGTCATACATGGCTGCAGCGTATAAAGGCTTGTTGATTCCGCTCATAATCATTGCACAAGCATTATTTCAATTCCTTCAAATTGCTAGTAATTGGTGGATGGCTTGGGCAAACCCTCAAACGGAAGGGGACCAGCCCAAAACAACCCCTAtggttcttcttcttgtttacATGGCCCTTGCTTTTGGGAGTTCTTGGTTTATATTTATGAGGGCTGTTCTGGTAGCTACATTTGGTCTAGCAGCTGCACAGAAGCTGTTTTTAAAGATGCTTAGAAGTGTTTTCCACGCACCAATGTCTTTCTTTGACTCTACTCCAGCCGGAAGGATCTTGAATCGAGTATCAGTTGATCAAAGCGTTGTGGATATTGACATTCCATTCAGACTTGGTGGGTTTGCTTCAACAACAATACAACTTATTGGGATTGTTGGTGTAATGACGGAAGTTACATGGCAAGTTTTGCTTCTAGTTGTCCCGATGGCTATTGCTTGTCTGTGGATGCagAAATACTACATGGCTTCCTCAAGGGAACTGGTTCGAATTGTAAGCATACAGAAATCTCcaattataaatctttttgCTGAGTCAATTGCTGGAGCGGCTACCATCCGAGGATTTGGACAAGAAAAAAGGTTCATGAAGAGGAACATGTATCTCCTGGATTGTTTTGCGCGTCCATTCTTCTGCAGTCTTGCGGCTATTGAGTGGCTATGCCTGCGCATGGAATTGCTGTCAACCTTTGTATTTGCTTTCTGCATGATTTTACTAGTGAGCTTTCCCCATGGAAGTATTGACCCCAGCATGGCTGGACTTGCTGTGACATATGGCCTGAATTTAAATGCACGCTTATCACGGTGGATACTAAGCTTTTGCAagcttgaaaataaaataatttctattgaAAGGATTTATCAGTACAGCCAAATTCCTAGTGAAGCTCCAGCAATTATTGAAGAATCTCGCCCTCCATCCACATGGCCTGAGAACGGGACAATTGGAATCATTGATTTAAAGGTTCGTTACAAGGAGAATCTTCCTTTGGTGCTTCGTGGAGTATCGTGTACATTTCCTGGTGGGAAAAACATTGGAATTGTTGGACGTACTGGGAGCGGCAAATCTACTCTGATTCAGGCGTTATTTCGTTTGATTGAACCATCAAGTGGAAGTATCCATATAGACAACATTGATATTTCAACAATTGGCCTTCATGATCTTCGAAGCCGTCTCAGTATCATACCACAAGAACCAACCTTATTTGAAGGTACCATACGAGCCAATCTTGATCCCCTTGAAGAGCACTCAGATAAGGAGATTTGGGAGGCACTAGATAAGTCTCAGCTTGGAGAGGTTATCCgtgagaaagaccaaaagctTGATACACCAGTGCTAGAAAATGGAGATAATTGGAGCGTAGGGCAGCGGCAACTTGTTTCCCTGGGTCGAGCTTTACTAAAGCAGTCAAGGATACTTGTACTTGATGAAGCAACAGCATCAGTTGATACTGCCACTGATAATCTCATCCAGAAGATTATTAGAACAGAATTCAGAGACTGCACTGTCTGCACTATTGCACATCGTATTCCTACTGTTATTGACAGTGATCTAGTTCTGGTACTTAGTGATGGCCGAGTTGCAGAATTTGACACTCCATTACGACTCTTAGAAGATAAATCCTCCATGTTTCTGAAGTTGGTGACTGAGTATTCATCAAGGTCTAGTGGCATACCAGacttttg 4598 0.4132 MAIIQFLNKFSALSTASGSSNALLRTIVGTPILEVAAICVNLSLLLVFLFVVSARQISVCFGRIRIRKDNTASNTSPIRHSIDGEIHDVKIGSGYKLSVLCCFYVLFVQVLVLGFDGAALIRKAANGKDVDWSVPALPAAQGLAWFVLSFSALHCKFKLSEKFPFLLRVWWVVSFVICLCTLFVDGRGFWVEGSKHLRPHVVANFAVTPALAFLFFVALRGVTGIQVCRNSDLQEPLLLEEEPGCLKVTPYSDAGLFSLATLSWLNPLLSIGKMRPLELKDIPLLAPKDRSKTNYKVLNSNWERLKSENPSKQPSLAWAILKSFWKEAACNAIFVGVNTIVSYVGPYMISYFVDYLGGEETFPHEGYILAGIFFAAKLVETLTTRQWYLGVDILGMHVRSALTAMVYRKGLRLSSLSKQSHTSGEIVNYMAVDVQRVGDYTWYLHDIWVLPLQIVLALMILYKNIGIAFIATLIATIISIVVTIPVAQVQENFQDKLMAAKDERMRKTSECLRNMRILKLQAWEDRYRMELEEMRGVEFKWLRKALYSQAFITFVFWSSPIFVSAVTFATCILLGGQLTAGSVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISGFLLEEELQEDATIILPRGISDIAIEIKNGVFCWDPSSSRPTLSGIQVSVERGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSSAYVPQSAWIQSGNIEENILFGSPMDKAKYKKVLHACSLKKDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFREYILTALADKTVVFVTHQVEFLPAADVILVLKEGRIIQAGKYDDLLQAGTDFNTLVSAHHEAIEAMDIPNHSSEDSDEFSESSVISNKKSIALANDIDSLAKEVQEGTSALDKKAMKEKKKAKRSRKKQLVQEEERVRGQVSMKVYLSYMAAAYKGLLIPLIIIAQALFQFLQIASNWWMAWANPQTEGDQPKTTPMVLLLVYMALAFGSSWFIFMRAVLVATFGLAAAQKLFLKMLRSVFHAPMSFFDSTPAGRILNRVSVDQSVVDIDIPFRLGGFASTTIQLIGIVGVMTEVTWQVLLLVVPMAIACLWMQKYYMASSRELVRIVSIQKSPIINLFAESIAGAATIRGFGQEKRFMKRNMYLLDCFARPFFCSLAAIEWLCLRMELLSTFVFAFCMILLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPAIIEESRPPSTWPENGTIGIIDLKVRYKENLPLVLRGVSCTFPGGKNIGIVGRTGSGKSTLIQALFRLIEPSSGSIHIDNIDISTIGLHDLRSRLSIIPQEPTLFEGTIRANLDPLEEHSDKEIWEALDKSQLGEVIREKDQKLDTPVLENGDNWSVGQRQLVSLGRALLKQSRILVLDEATASVDTATDNLIQKIIRTEFRDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPLRLLEDKSSMFLKLVTEYSSRSSGIPDF 1532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02726 1532 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 969 1239 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g02726 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1276 1515 IPR027417 -
Bva04g02726 1532 SUPERFAMILY ABC transporter transmembrane region 966 1266 IPR036640 GO:0005524|GO:0016021
Bva04g02726 1532 CDD ABCC_MRP_domain1 643 843 - -
Bva04g02726 1532 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 332 609 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g02726 1532 Pfam ABC transporter transmembrane region 969 1211 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g02726 1532 Pfam ABC transporter transmembrane region 333 597 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Bva04g02726 1532 ProSitePatterns ABC transporters family signature. 768 782 IPR017871 GO:0005524
Bva04g02726 1532 SMART AAA_5 670 851 IPR003593 -
Bva04g02726 1532 SMART AAA_5 1312 1497 IPR003593 -
Bva04g02726 1532 CDD ABC_6TM_ABCC_D2 967 1261 IPR044726 GO:0140359
Bva04g02726 1532 Pfam ABC transporter 661 795 IPR003439 GO:0005524
Bva04g02726 1532 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 643 866 IPR003439 GO:0005524
Bva04g02726 1532 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 79 1532 - -
Bva04g02726 1532 Coils Coil 921 944 - -
Bva04g02726 1532 Gene3D ABC transporter type 1, transmembrane domain 299 624 IPR036640 GO:0005524|GO:0016021
Bva04g02726 1532 Gene3D ABC transporter type 1, transmembrane domain 928 1267 IPR036640 GO:0005524|GO:0016021
Bva04g02726 1532 Pfam ABC transporter 1303 1451 IPR003439 GO:0005524
Bva04g02726 1532 Gene3D - 625 888 IPR027417 -
Bva04g02726 1532 SUPERFAMILY ABC transporter transmembrane region 318 623 IPR036640 GO:0005524|GO:0016021
Bva04g02726 1532 CDD ABC_6TM_ABCC_D1 330 617 IPR044746 GO:0140359
Bva04g02726 1532 PANTHER MULTIDRUG RESISTANCE PROTEIN ABC TRANSPORTER FAMILY PROTEIN 79 1532 - -
Bva04g02726 1532 Gene3D - 1269 1522 IPR027417 -
Bva04g02726 1532 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1286 1520 IPR003439 GO:0005524
Bva04g02726 1532 CDD ABCC_MRP_domain2 1284 1504 - -
Bva04g02726 1532 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 640 865 IPR027417 -
Bva04g02726 1532 MobiDBLite consensus disorder prediction 919 939 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02726 Bva-Chr4 23768399 23775895 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02726 643 859 Calmodulin-binding Proteins AT2G36910 28.571 9.74e-22 100
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02726 04 23768399 23775895 Bva04g02726 04 23768399 23775895 ECH