Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02721 ATGGCTACTCAAGGTCAAGTGATTACCTGCAAAGCGGCGGTGGCCTGGGAACCCAACAAGCCATTGGCCATAGAAGACGTTCAGGTGGCTCCGCCGCAGGCTGGGGAGGTCAGAGTCCAAATCTTGTTTTCTGCTCTCTGTCACACCGATGCTTATACGTGGGGCGGCAAGGATCCGGAAGGTCTCTTCCCATGCATTCTTGGTCATGAAGCAGCCGGGATCGTAGAAAGTGTTGGAGAAGGTGTTACTGAAGTTCAGCCTGGAGATCATGTCATCCCTTGTTACCAGGCTGAATGCAAAGAATGTAAGTTTTGCAAATCTGGCAAAACAAACCTTTGTGGCAAAGTTCGTGCTGCCACTGGAGTTGGGGTTATGCTGAGTGATCGCAAGAGCCGTTTCTCTATTAATGGAAAGCCCATCTATCATTTTATGGGAACCTCAACATTTAGTCAATACACTGTTGTTCATGATGTTAGTGTGGCTAAGATTGATCCAAAAGCTCCTTTGGAGAAAGTATGTCTTCTTGGATGTGGGGTTCCAACTGGCCTTGGAGCTGTATGGAACACTGCAAAAGTGGAACCAGGTTCAATTGTTGCTGTTTTTGGACTTGGAACTGTTGGGCTTGCTGTTGCAGAGGGTGCAAAAGCTGCTGGTGCATCACGGATTATTGGCATAGATATTGACAGCAAAAAGTTTGATACAGCAAAAAATTTCGGAGTCACTGAATTTATTAATCCAAAAGACCATGAGAAACCAATTCAGCAAGTCATAGTTGATCAGACCGATGGTGGAGTTGACTACAGTTTTGAGTGCATTGGAAATGTGTCAGTGATGAGGGCTGCTTTGGAATGCTGCCATAAGGGGTGGGGAACGTCAGTTATTGTGGGTGTTGCGGCATCAGGGCAGGAAATCTCAACTCGTCCTTTCCAGTTGGTGACTGGCCGTGTCTGGAAGGGAACAGCTTTTGGTGGATTCAAGAGCCGTTCACAAGTGCCTTGGCTTGTAGACAAGTATTTGAAGAAGGAAATTAAGGTTGATGAGTACATTACCCACACATTGACTCTTGTGGAGATCAACAAGGCATTTGATCTTATGCACGAAGGGGGATGTCTTCGTTGTGTGCTTGCAATGTTCTA 1136 0.4639 MATQGQVITCKAAVAWEPNKPLAIEDVQVAPPQAGEVRVQILFSALCHTDAYTWGGKDPEGLFPCILGHEAAGIVESVGEGVTEVQPGDHVIPCYQAECKECKFCKSGKTNLCGKVRAATGVGVMLSDRKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPKAPLEKVCLLGCGVPTGLGAVWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDTAKNFGVTEFINPKDHEKPIQQVIVDQTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRSQVPWLVDKYLKKEIKVDEYITHTLTLVEINKAFDLMHEGGCLRCVLAMF 378
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02721 378 Gene3D - 13 372 - -
Bva04g02721 378 Pfam Alcohol dehydrogenase GroES-like domain 35 162 IPR013154 -
Bva04g02721 378 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 68 82 IPR002328 GO:0008270|GO:0016491
Bva04g02721 378 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 168 341 IPR036291 -
Bva04g02721 378 SUPERFAMILY GroES-like 3 198 IPR011032 -
Bva04g02721 378 Pfam Zinc-binding dehydrogenase 206 330 IPR013149 -
Bva04g02721 378 CDD alcohol_DH_class_III 8 375 IPR014183 GO:0006069|GO:0008270|GO:0051903
Bva04g02721 378 SUPERFAMILY GroES-like 326 375 IPR011032 -
Bva04g02721 378 TIGRFAM adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 10 377 IPR014183 GO:0006069|GO:0008270|GO:0051903
Bva04g02721 378 PANTHER S-(HYDROXYMETHYL)GLUTATHIONE DEHYDROGENASE 3 376 - -
Bva04g02721 378 PANTHER ALCOHOL DEHYDROGENASE 3 376 - -
Bva04g02721 378 Gene3D - 182 320 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva04g02721 Bva-Chr4 23742287 23745614 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02721 10 331 Monolignol Biosynthesis Gene Families AT1G72680 27.356 1.53e-16 78.2
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02721 K00121 - twl:120006873 734.176
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02721 04 23742287 23745614 Bva04g02721 04 23742287 23745614 ECH